| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0414 |
|---|
| Symbol | |
|---|
| ID | 6274832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 494569 |
|---|
| End bp | 495138 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642612464 |
|---|
| Product | phosphoheptose isomerase |
|---|
| Protein accession | YP_001877033 |
|---|
| Protein GI | 187734921 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0279] Phosphoheptose isomerase |
|---|
| TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.113258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAT ACATCAGGAA CCAGATTTTA GGGATAGCGG ACAATTTCAA AGCCCTGGCT
TCCATGGCCG GGGATATTGA GCAGGTTGCC CGCATTTGTA CGGATACCCT TAAGGCCGGG
AATAAGATCA TGTTCTGCGG CAACGGAGGC TCCGCTGCGG ATTCCCAGCA CCTGGCCGCC
GAATTGGTGG GGCGTTACAA GCTGAACCGC CCCGCCATGA ATGCGCTGGC CCTGACGGTG
GATACTTCCA TCCTGACCGC CGTGGGCAAT GATTACGGTT ATGAGACGGT GTTTTCCAGG
CAGCTGGAGG GAGTGGGCCG TCCCGGAGAT CTGCTGGTGG GGCTTTCCAC GAGTGGCAAC
AGCCGGAACA TCGTTTTGGC GATGGAGCTG GCGCGCCGGA TGGGCGTCCG GACGGTGGCC
TTGACAGGCC GCGGAGGCGG AGAGATGAAA GAAGTTGCGG AGTTTTGCAT TGCCGTTCCT
TCCGATGCCA CGAACAACAT TCAGGAGATG CACATTGCAG TGGGGCATCT GGTTTGCGAA
CTGGTTGAAC GGGAGATATA TGGCGGGTAA
|
|---|
| Protein sequence | MSEYIRNQIL GIADNFKALA SMAGDIEQVA RICTDTLKAG NKIMFCGNGG SAADSQHLAA
ELVGRYKLNR PAMNALALTV DTSILTAVGN DYGYETVFSR QLEGVGRPGD LLVGLSTSGN
SRNIVLAMEL ARRMGVRTVA LTGRGGGEMK EVAEFCIAVP SDATNNIQEM HIAVGHLVCE
LVEREIYGG
|
|---|
| |