Gene Amuc_0391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0391 
Symbol 
ID6274843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp472594 
End bp473271 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content56% 
IMG OID642612442 
ProductPeptidase M23 
Protein accessionYP_001877011 
Protein GI187734899 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTATT TCCGTTTTTT ACTGCTGGCG CTGGTTTTTC TGACCGGTTC CGCGTTGATC 
AGCGAGAGCG CTCCCGTTTA CATGGCCCGG CGGGACAGCA AGTTTGCGCT TGTTCCTCTT
TGTGACGGTT TTGATTTTCC GGTAGGAAAG CCTGACGGCA ACGGCTATTA CCGGTCCCGC
GGTCTGCGTC TGAAAAGCCC CCGTCACATG GGTGAGGATT GGAACGGCAA TAAAGGAGGC
AATTCCGATT TGGGCGATCC CGTTTATTCC GTAGGCCACG GGGTGGTAAC TTATGCGGCG
GACGCCCGGG GCGCGTGGGG AAAGGTGGTG ATTGTGCGCC ATGCTTTCCG CGAACCCAAG
TCCGGAAAGG TTCTTTGCTG CCAGACGCTT TATTCCCATT TGAACGATAT TAACGTTGTT
TTGGGGCAGT TGGTGCTGCG CGGCACCCAG GTGGGCACTA TCGGCACGAA CCGCGGCATG
TATCCGGCCC ATCTTCATGT GGAGCTGCAT TACAATCCGG ATGTGAATTG CGGCCATCAG
GGGATTCCCA AGACGGAGCG CAATTACGGC CGCCTGACGG ATTTTATTAC CCGCTTCCGC
CGCCTGCCTC TGGAGAAAAG GATGGTGCGC GTTCCCATCG GCGGGTTTCT GCCTTACAAG
GGAACGGAAG GACTCTGA
 
Protein sequence
MSYFRFLLLA LVFLTGSALI SESAPVYMAR RDSKFALVPL CDGFDFPVGK PDGNGYYRSR 
GLRLKSPRHM GEDWNGNKGG NSDLGDPVYS VGHGVVTYAA DARGAWGKVV IVRHAFREPK
SGKVLCCQTL YSHLNDINVV LGQLVLRGTQ VGTIGTNRGM YPAHLHVELH YNPDVNCGHQ
GIPKTERNYG RLTDFITRFR RLPLEKRMVR VPIGGFLPYK GTEGL