| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0376 |
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| Symbol | |
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| ID | 6274864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 450548 |
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| End bp | 451192 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642612427 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_001876996 |
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| Protein GI | 187734884 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.756236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAGGA AGGAATGCCT CTCATCCTGC CGTCTGTACG GTATTGTAGA TATGGGATAT
ACAGCTGAAC ATCAACTACT CCCTGTAACA GAAAAACTAT TGGCAGGCGG CCTGCGCATT
CTCCAGCTAA GGGCAAAAAA CCATAACCCG GAACACATTG AAAATATGGG GCTCCAGCTT
GCCCCCCTGT GCCGTAAATA CGGCTGTCTT TTCATCATCA ACGATTATCC TGAAATTGCC
CTGAACATCG GCGCAGACGG CGTCCATCTG GGACAGGATG ACGGAGACTT GGCATCCGTA
AGGGGGCTGC TGGGAAAGGA TGCCGTTATA GGACGGTCCA CGCATAGTCC TGAACAGGCC
TTGGGTGCAT GTGGAGAGCA GGCGGACTAT ATCGGGTTTG GGCCCTTGTT CCCCACGGGT
ACCAAACCGG GAAGACAGGC CATTGGCCTG GAAGACATCG CAAGCGTACA GCAACAGCTA
CCGGAAAATT TCCCTGTCTT CTGTATCGGC GGCATCAATG GGAACACACT GCCCTCCGTA
CTGGAGGCGG GGGCAAACAG GGTAGTCATC GTTTCCTGGC TGCTTACACA CCCCGACATC
ACGGGAACAG TCAGAACTCT CAGAAAAGAA CTGGGAGAAG CGTAA
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| Protein sequence | MNRKECLSSC RLYGIVDMGY TAEHQLLPVT EKLLAGGLRI LQLRAKNHNP EHIENMGLQL
APLCRKYGCL FIINDYPEIA LNIGADGVHL GQDDGDLASV RGLLGKDAVI GRSTHSPEQA
LGACGEQADY IGFGPLFPTG TKPGRQAIGL EDIASVQQQL PENFPVFCIG GINGNTLPSV
LEAGANRVVI VSWLLTHPDI TGTVRTLRKE LGEA
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