Gene Amuc_0367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0367 
Symbol 
ID6274911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp433636 
End bp435423 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content61% 
IMG OID642612418 
ProductChloride channel core 
Protein accessionYP_001876987 
Protein GI187734875 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTC CACTCCCCCA GTCCCAGCCG CCGGATTCCG TCTGGTACGG ATGGATTTTA 
AAACTGTTCC ATCATTGGAA GGTGGGGGAA AGGCAGGTTA CTTATGTATG GGCCGTTCTC
GTCGGCATGG TGGGCTCCTG CATGTCTCTG TTTTTCGAGT GGATGGTGGA AGTGATCCAG
TGGATGCTCA CCGGCATCTG GTCGGATTCC CGCGTAGGAA CCTTTTCCCT GGTGGAGCCG
GAATGGCGCA TGTTTATTCC GGTGGCGGGC GGCCTGGTGG CCGGCTGCAT TCTGCTGTTC
CTGAAGAAAA GGATGCCGGG GCAGGCTATG GAATACATGG AGGCCATGTC CATCGGGAAC
GGGCTGATCA AGTTCCGGGC CTCCGCCCTG AAAGTTTTTT CCGCGGCATG GAGCATCGCT
TCCGGCGCGG CCATCGGCAA GGAAGGGCCT ATCATCCAGT CTTCCGCCCT GATTGCGTCT
ACCGTGGGGC AGCGTCTGCA CGTATCCATT CCGCGGCTCC GTCTGCTGGT CGGCTGCGGA
GCGGCAGCCG GGTTCACGAC GGCGTTTCAT GCCCCTTTTT CCGGCTGCCT GTTCGTGAGT
GAAATCATCA TCGGTACCGT GAGCATGGAT ATTCTGGCCC CCCTGCTCAT TGCCTCCTGT
ACCGGGTTCG TGATGCTGCA TCTGCTGGGG GATCCCTCCC CTTTGTACAG TTCCCCGTTT
GAAAGCTTTA CTGTCTTTTC CCAGTCTCTC TGGTGCATCG CCCTGGGGGC GGCGGCGGCC
GTGGCGGCCA GGGGATGGGT CAGTTTGCTG GATGCGGCCG CCAGATATTT GAATGGCCGC
CAGTCCCTTC TGCCGCTGCG TTTGGCGGCC GCCGGGCTGG TCGTGGGGAT TCTGGCCGTT
TTTTATCCGG AAGTGGTGGG CAACGGTCAG GCTCTCATTA CCGGGCTGGT CCATGAGGAT
TACGGCACGC GGGAGGCGCT CGTCCTGCTT CTGGTGAAGG TGTCTGCCGT GGCGGTGGTG
TTCGGCTGCG GTACGGTGGG CGGAGCCATG ACGCCCACCC TGTACGTGGG GAGCATGGTG
GGTTTTATCT TCAGTACGGT TCTGACGTCC CTGGGAATGG AGGGCAACCA TACGGTGGCA
TATGCGATGG TGGGGATGGC GTCCTTTTTC GCCGTAGCTG CCCAGGCCCC CCTGACGGCC
CTGGTGATGG TGGTGGAGTT TTCCATGAGC GGACAGATGA TTTATCCCTT GCTGATCGGT
GTCGTAAGCG CTTATGGCAC GGGAAAACTG ATTCGCGCGC GTTCCATGTA TGCCGCCAGC
CTGGCCGGCA GTCCGGCGTC CGTCGTCAAC CTGCCCATGG CGCAAGTCCA TGTGCATGAC
CTGGCGCGGC ACGTGGTGCC CCAGGTGGCC CCGGATGCTT CCCTGGATGA TGTCTCCTCC
CTGATGCTGC GGAATCCCGG AGATCTGGTT TTTGTGGTGA ATAAGGATGG AATTTATGAA
GGGGCCATCT ATCCGGAGGA CTTTCTGGCG GTCCGCCGGC AGATGGAGGA GCGGAAGGGG
GCGGTTCCGG CCGATGCCGG GTCCTTGGTT CGTACGGGGG CTCCCGTGCT GGACGCCGGC
ACCCATCTGA CGGATGCCTT GAAGCTGTTT GAACAAACCC ATCTGCCCGC CTTTCCCGTG
GTCTGGAAGA ATACCGGTCG GCTAGACGGC GTGCTGTACC GCAACGCGTT GTTCCAGGTT
ATCACGGAGA TGATGAAACG GGAGTCCGGC GGAGACGTGG GCATGTAA
 
Protein sequence
MNSPLPQSQP PDSVWYGWIL KLFHHWKVGE RQVTYVWAVL VGMVGSCMSL FFEWMVEVIQ 
WMLTGIWSDS RVGTFSLVEP EWRMFIPVAG GLVAGCILLF LKKRMPGQAM EYMEAMSIGN
GLIKFRASAL KVFSAAWSIA SGAAIGKEGP IIQSSALIAS TVGQRLHVSI PRLRLLVGCG
AAAGFTTAFH APFSGCLFVS EIIIGTVSMD ILAPLLIASC TGFVMLHLLG DPSPLYSSPF
ESFTVFSQSL WCIALGAAAA VAARGWVSLL DAAARYLNGR QSLLPLRLAA AGLVVGILAV
FYPEVVGNGQ ALITGLVHED YGTREALVLL LVKVSAVAVV FGCGTVGGAM TPTLYVGSMV
GFIFSTVLTS LGMEGNHTVA YAMVGMASFF AVAAQAPLTA LVMVVEFSMS GQMIYPLLIG
VVSAYGTGKL IRARSMYAAS LAGSPASVVN LPMAQVHVHD LARHVVPQVA PDASLDDVSS
LMLRNPGDLV FVVNKDGIYE GAIYPEDFLA VRRQMEERKG AVPADAGSLV RTGAPVLDAG
THLTDALKLF EQTHLPAFPV VWKNTGRLDG VLYRNALFQV ITEMMKRESG GDVGM