| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0365 |
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| Symbol | |
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| ID | 6274914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 431014 |
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| End bp | 431913 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642612416 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_001876985 |
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| Protein GI | 187734873 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCC TTGACCATCT TTTATCGGCC GTCTCCCGGT CCTTTTATCT GAGCATGCGC
TTCCTGCCCC GGGAAATGCG CCCCGGCGTG GCCGTGGGCT ATCTGCTGGC GCGTGCCACG
GATACGGTGG CGGATGCCGT GGACATGGAT TGCCGGGAGC GCCTGGCGCT TTTGAGGATG
ATGGGGGAGA CGGTGGCCGG CTCTGCCTCC CGGGAGGTTG CCGCCACCTG TTTTGGCCGT
CTGGGCGTTC TTTCCACAAT CCAGACGCAC CGGGGGGAGG CGGAATTGCT GGCCCGTTTC
CCCGAATGCC TGGCGCTGCT GGAAAACCTT TCCCCGCATG AACGGATGCT GGTGCGGCAG
GTGCTGGCCT CCATCGTGGA GGGACAGGCG TGGGATTTGA TGTATTTTGA AAGCCATGCT
GCCGTCTCAT GCCCGGAACA GCTGGAACAT TATACTTACA TGGTGGCCGG ATGCGTAGGG
GAATTCTGGA CCAGGCTGGG CTTGCTGGCC CAGGGGCCGG GCTTCAGCAC GCAGCCGGAG
GAGCAGCTTT TGCGCTGGGG CAGGCACTAT GGCATGGGGC TGCAGTTGGT GAATATCCTG
CGTGACCGGG AGGAAGACCT CGCCCGCGGA AGAAGCTATT TGCCTGCCCC AGATGACCGT
CCATGGCTGG ACCGCGCGGA ACGCTGGCTG AAGGAAGGCG TGTTTTACGC GGAATCTCTG
CGGAACGGGC GGCTGCGTTT TTCCACCGTC CTGCCCGCCT GGCTGGGGCT GGACACGCTG
GAACTGCTCC AGCGGGCGGA TCGGCGGCAT CCGTCTTCCG GGAAGGTGAA GATTGCGCGC
GGAGACGTTT ATTTACGGAT GTGGAAAGCC TTTCTTTTTT CTTGGAAAGA GGCTCTGTAG
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| Protein sequence | MKGLDHLLSA VSRSFYLSMR FLPREMRPGV AVGYLLARAT DTVADAVDMD CRERLALLRM
MGETVAGSAS REVAATCFGR LGVLSTIQTH RGEAELLARF PECLALLENL SPHERMLVRQ
VLASIVEGQA WDLMYFESHA AVSCPEQLEH YTYMVAGCVG EFWTRLGLLA QGPGFSTQPE
EQLLRWGRHY GMGLQLVNIL RDREEDLARG RSYLPAPDDR PWLDRAERWL KEGVFYAESL
RNGRLRFSTV LPAWLGLDTL ELLQRADRRH PSSGKVKIAR GDVYLRMWKA FLFSWKEAL
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