| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0351 |
|---|
| Symbol | |
|---|
| ID | 6274956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 415130 |
|---|
| End bp | 415954 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642612402 |
|---|
| Product | naphthoate synthase |
|---|
| Protein accession | YP_001876971 |
|---|
| Protein GI | 187734859 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
|---|
| TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.621273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC AATGGATCAC CGCCAAGGAA TACACGGACA TCAAGTATGA AACAACGGAC
AACGGCAGCA TCGCAAAAAT CACGATCAAC CGCCCCCACG TCCGCAATGC GTTCCGTCCC
CTGACCGTGC ATGAAATGCT CAACGCCCTG AACGCCGCTC ATGAAGACCC CAAGGTGGGC
GTGGTCATCC TGACCGGGGA AGGCCCGGAC GCTTTCTGCT CCGGAGGCGA CCAGAAAGTG
CGCGGAAATG CCGGCTACAT CGGTGAAGAC GGCGTGCCGC GCCTGAACAT TCTGGACGTG
CAGCGCACCA TCCGCACCAT GCCCAAGCCC GTCGTCGCCA TGGTGGCCGG ATACGCCATC
GGCGGAGGTC ACGTCCTCCA CGTCGTCTGT GACCTCACCA TTGCCGCGGA CAACGCCAAA
TTCGGACAGA CAGGGCCCAA AGTGGGCTCT TTTGACGGAG GCCTCGGCTC CTCCTACCTG
GCGCGCATTG TGGGCCAGAA AAAAGCGCGG GAAATCTGGT ACCTGTGCAG GCAGTACGAT
GCCCGGCAGG CGCTGGACAT GGGCCTGGTC AATACCGTGG TTCCCCTGGA GGACCTGGAG
GAGGAAACGC TCTCCTGGTG CCGCCAGATG CTCCGCCACA GCCCTCTGGC CCTGCGCTGC
CTGAAGGCAT CCCTGAACGC CGACTGCGAC GGGCAGATGG GCCTGCTGGA CCTGGCCGGC
AACGCCACCC TGCTCTATTA TATGAGCGAG GAAGCGAAGG AAGGCAAAAA CGCCTTCGTT
GAAAAACGCG CTCCGGATTT TTCCAAATTC CCCAGACTTC CGTAA
|
|---|
| Protein sequence | MSAQWITAKE YTDIKYETTD NGSIAKITIN RPHVRNAFRP LTVHEMLNAL NAAHEDPKVG
VVILTGEGPD AFCSGGDQKV RGNAGYIGED GVPRLNILDV QRTIRTMPKP VVAMVAGYAI
GGGHVLHVVC DLTIAADNAK FGQTGPKVGS FDGGLGSSYL ARIVGQKKAR EIWYLCRQYD
ARQALDMGLV NTVVPLEDLE EETLSWCRQM LRHSPLALRC LKASLNADCD GQMGLLDLAG
NATLLYYMSE EAKEGKNAFV EKRAPDFSKF PRLP
|
|---|
| |