Gene Amuc_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0342 
Symbol 
ID6274984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp402996 
End bp403403 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content56% 
IMG OID642612393 
ProductOsmC family protein 
Protein accessionYP_001876962 
Protein GI187734850 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1765] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.720795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.012657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAA CTAAAACGAC GTACGAGGGC GGCCTCCATT GTTCCATGGT TCATGAACCT 
TCCGGGGCCA CGCTTTCCAC GGATGCCCCC GTGGACAACA ACGGCAAGGG CGAGTCCTTT
TCCCCCACGG ACCTGGTAGG AGCGGCGCTT GCCGGCTGCA TGAGCACGAT CATGGGTATT
GTTGCCGAAC GTAAGGGGAT TAATCTGGAA GGCATGACGG TGGAAGTGGC CAAACACATG
AATGCGGATC CCCGCCGTAT CGGCAAGCTG GAAGTCGTCA TTACCGTTCC TCTTCCGTCC
GATTATCCGG ACAGGAAGCT GCTGGAACAG GCTGCTCTGA GCTGCCCGGT CAAGCACAGC
CTGCACCCTG ATATTGAAAT ACCCATTACC TGGAAGTGGG TTGGCTGA
 
Protein sequence
MVKTKTTYEG GLHCSMVHEP SGATLSTDAP VDNNGKGESF SPTDLVGAAL AGCMSTIMGI 
VAERKGINLE GMTVEVAKHM NADPRRIGKL EVVITVPLPS DYPDRKLLEQ AALSCPVKHS
LHPDIEIPIT WKWVG