| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0334 |
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| Symbol | |
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| ID | 6275008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 391336 |
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| End bp | 394161 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612385 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_001876954 |
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| Protein GI | 187734842 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.530518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0000549339 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGTTGA TGTTCAAACT GATTTGGAGG GATCTGCGCG CCAACCCCGG CCGAATGGCT
GTCAGCGTGT TCGCCATCCT TGTCTCCGTC AGCCTCATTG TATGGATGAT GGGGAGCTAT
GATACGCTGG TCAGGGAGTT TGACAATGAT GCGGAGGCCT ATATGGGGAA TTATGACCTC
TGCCTGGTGC CGGAGTCTCC CAAAGGGCCC CTTCCTCCCG GACAGTACCC GCAGTTCCGT
GACCCGGAGC TGCCCGCCCG TCTGGCCGCC TCTCCCCTTG TGGAAACGGT GAACGCCGCG
TGCCAGGTGC CGCGCCTCCA AATCGGCTGC GGAAATGAGC GGGGCAGCTT TGACGAGCAG
ACGCGCGACC GCATGGGAAT TCCTCCCCAG AGCCCCATCC TGGTGGGAAA CCATGCTGTG
GAGTGTCCTT ATGAATTGAA AGAGGGAATT TGGCCGGATA TGGCTTCCTC CTCAGCCATG
GAGGGGGTGC TGGGCAGCGG AAGCGCCAAA TATTTCAGCG CGGGAGTGGG GACTGTCATG
AACGTGCGCG TGGGAACGCA TGTGTACGAC GTAAAGATTG TGGGCATCGT CAAGCAGGCC
AAGGCCACCC CCGGCGTCAT TATGGGGCCG GGCGGCATGT CCGGCCCGGC TTTTTCCTCC
CTTTTTGTGC CCGTGAAGGT ATGCGAGAAA ATTACGGGGC AGCCTTTTGC CCCTAATTTG
ATTTACGTTC AGCTCAAGGA AGGGGTGGAC AAAAAGGAAT TTGCTGAGAA TTTCCGGCAG
GAGCTGGTCC AGGCTTCCGC TGCGGTGGCG GATACGGATT CCATCATCCG GCGGCTTTCC
AGCGACCGGG CCGTCCGTTC ACAGAAGGAT AGCGCGGAAA TGTCCGTCTG GCTTGTCCTG
TTTTCCTGTA TTTTCATTAT TTTCACAACG TTGAGCATTG GCGTCAGCGA ACGTGCCCGC
AGACTGGCCC TGATGCGTGC TCTGGGGCTG GGGCGCATGC AAATTGCACT GCTGATTGCA
GGGGAGGGGA TTTTTCTGTG CATTCCGGCA TTGCTGGGAG GGTTGGCCGC AGGCTTTTTC
CTGGTGTACC TGCTGGAGGA AGGCTCTGCC TCTGTACCCG TGCTGACCTG GTCCACAGTA
TTAACCGCCG CCGTATGCGC TGTGGGCGGG GCCTTGCTGG CTTCCATTAT TCCTGCGTGG
CGCGCTTCCC GCCAGTCTCC GCTGGAAGCG GCCGTTCCTT CCTCCGGATT CATCGGGAAG
GTGAGCCGTG TTCCTGTGTG GTCTGTCGTG GCGGGCCTCG CATGCGTGTG TCTTCAGCCT
GCGGCCCTGC TGTTGCCGGG CCTGGAGGTA GAAACGCGCA AATGGATATT TTTCTGGCTG
GGTTACCCCG GCCTGGTAGC CGGTGCGCTG TTTCTGGCCC CCACCTTCGT GCGCGTGACG
GAGTGGGCCG GGGCATGGAT TACCGGATTT CTGCTGCACG TTCCGCATTC TTTCCTGAAA
ATGCAGCTCA GCCGCAACCT CAGCCGTTCC GTGGGAACTG CCGTATCCAT GTCTGTGGGC
CTCTCTCTTT TTGTGGGGGT GCAGACATGG GGCTATTCCA TGCTGGTTCC TTTTTCCCCG
GATACGTCAA CACCCGGAAC CCTGGTTTCC TTCCTGCATA CGGAGTTCAA ATCTGCGGAT
GTTCCGGAGC TGATGGCGCG CCCCAGCCTG CGGAATTCCC GAATGTATCC CATCTACGTG
GATGAACCGG ATATTGCTCC GGCACAGATG AAAAGCCCCG GTTTTTCCGG GATGCGCAAC
CGTTCCATCG TACTGGCCGG CATTCCCGTG GCGGAGATGG CCGGGGGGAG CCATCCGCTG
TTCAACCCCG TGTTTGTTTC CGGAAATCCG CAGGAGGCTT ATGCCATGCT GGAATCCACC
CGTTCTCTCC TGATTCCGGA CACGTTTGCA CGGACGGTGG GGTTGAAGGT CGGGGATGAC
TTGATGCTGG TTAATCCGTC TTCCCGGGAA CGCCGTTCCG GAAATGAGCC CTCTGCCGGT
ATTCGCGGCC GGGGCAGGGG TGGCGCCGTA CGGGGAGAAC CCTGGAAGGT GGCGGGAATA
GTTTCCTTCC CCGGCTGGCA TTGGTTGACC AAGACCAGCG GAATGCGCGT GCGCCGCGGG
GGTTTTGTTG CCGCTTTGGC GATTGCCGAT GAACGCTGGC TCAAAGAGGA ATACGCTCAT
CAGGGATTCC AGTTTATCTG GGGGGATACT GCTCCGGGGA TCAGCAACGT GGAACTTCAG
AACGACCTGG GGGAATACGC CCTGATGAAG GTGCGGGAGC AGGAAAACGG AGGGGAAGGC
GCCAAGCCTC TGGTGAAGGC CCTGACCCGG GAAAGCCTGG GAGGAAGCGT TACCAGCCGC
GGGGACGATG TGATTTTTAC GATGAGCAAG CTTCCCATCA TCATGATGGT GATCGCCGTT
CTGGCCGTAC TTAACACCGT CCTGGCTTCC GTGCAGTCCC GCCGCCGGGA GTTTGGATTG
ATGCGTGCGG TGGGCGTGCC GGGCGGCATG GTGATGCGGA TGCTCTGGGC GGAAACGCTG
ATGGTTTCCC TGTGCTCCGT TGTCATGAGT CTTGTGCTGG GAGTCCTGGG CGCCTGGTGC
TCCATCCAGA TTTTGGAATA CGGCTATCAC TTCGGCGTCG TTACTCCTCC TGTCACGATG
CCTTGGGCGC ATCTGGCCTG TGCTGTGCTT TTGGTGCTTT CCCTCTCATC CTTGGCGTGC
CTTCTGCCTG CGTGGCGCAT GAAGCATGCG TCCGTAACGG ATTTGCTTTC CGTTCGCGAG
GGGTAG
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| Protein sequence | MTLMFKLIWR DLRANPGRMA VSVFAILVSV SLIVWMMGSY DTLVREFDND AEAYMGNYDL
CLVPESPKGP LPPGQYPQFR DPELPARLAA SPLVETVNAA CQVPRLQIGC GNERGSFDEQ
TRDRMGIPPQ SPILVGNHAV ECPYELKEGI WPDMASSSAM EGVLGSGSAK YFSAGVGTVM
NVRVGTHVYD VKIVGIVKQA KATPGVIMGP GGMSGPAFSS LFVPVKVCEK ITGQPFAPNL
IYVQLKEGVD KKEFAENFRQ ELVQASAAVA DTDSIIRRLS SDRAVRSQKD SAEMSVWLVL
FSCIFIIFTT LSIGVSERAR RLALMRALGL GRMQIALLIA GEGIFLCIPA LLGGLAAGFF
LVYLLEEGSA SVPVLTWSTV LTAAVCAVGG ALLASIIPAW RASRQSPLEA AVPSSGFIGK
VSRVPVWSVV AGLACVCLQP AALLLPGLEV ETRKWIFFWL GYPGLVAGAL FLAPTFVRVT
EWAGAWITGF LLHVPHSFLK MQLSRNLSRS VGTAVSMSVG LSLFVGVQTW GYSMLVPFSP
DTSTPGTLVS FLHTEFKSAD VPELMARPSL RNSRMYPIYV DEPDIAPAQM KSPGFSGMRN
RSIVLAGIPV AEMAGGSHPL FNPVFVSGNP QEAYAMLEST RSLLIPDTFA RTVGLKVGDD
LMLVNPSSRE RRSGNEPSAG IRGRGRGGAV RGEPWKVAGI VSFPGWHWLT KTSGMRVRRG
GFVAALAIAD ERWLKEEYAH QGFQFIWGDT APGISNVELQ NDLGEYALMK VREQENGGEG
AKPLVKALTR ESLGGSVTSR GDDVIFTMSK LPIIMMVIAV LAVLNTVLAS VQSRRREFGL
MRAVGVPGGM VMRMLWAETL MVSLCSVVMS LVLGVLGAWC SIQILEYGYH FGVVTPPVTM
PWAHLACAVL LVLSLSSLAC LLPAWRMKHA SVTDLLSVRE G
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