Gene Amuc_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0330 
Symbol 
ID6275019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp389036 
End bp389482 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content47% 
IMG OID642612382 
Producthypothetical protein 
Protein accessionYP_001876951 
Protein GI187734839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.13206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.000000768464 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACAATTC CGGTTCTTAA TGAGAATCTA ATAGCCATCT GCGAGAAATA CGGCTACAAT 
GTGCCGAAAG TCAACGAGCA GGTGTTGAAC CGCTACATCA AGAACATTCT CAAAGATTTG
TCGGAAATTA TGCCGACCCT TGCTGAGAAA GTGCCGACCC GATTGACTAT GAAGCAGAAG
GAGGCACTGA AAAAAGAAGG CAAGGAAGCT GAGACCGACC TCAACGGCAA CGTTATTGTT
CCGCGTTATG CTTGTGTAAC TTCGTATACC GCCCGAAGAA CAGGAATCAC CAATATGTAC
CTCTCCCACA AATACACGAT GCTCCAGATG ATGCACGTCA GCGGCCACAA AACCCAAAAG
ACCTTCATGG ACTACATCAA ACTCTCCTCC GAAGAGATAG CCGATGAAAT CGCCGCAATG
TCGAAGAAAG AGTGTGAGAT GTGGTGA
 
Protein sequence
MTIPVLNENL IAICEKYGYN VPKVNEQVLN RYIKNILKDL SEIMPTLAEK VPTRLTMKQK 
EALKKEGKEA ETDLNGNVIV PRYACVTSYT ARRTGITNMY LSHKYTMLQM MHVSGHKTQK
TFMDYIKLSS EEIADEIAAM SKKECEMW