Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0328 |
Symbol | |
ID | 6275021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 385486 |
End bp | 387501 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642612380 |
Product | hypothetical protein |
Protein accession | YP_001876949 |
Protein GI | 187734837 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00012649 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00000371301 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAGAC ACATTTATCT GCCAGAGCTA TTGAGTATAA ATATTAAGAA TTATACTTTA TACCCCAACG GTTTGGATTA CACCTTTGAT TTTGTTAAAG GCGTCAATCT TGTGCTAGGT GGTAATGGCA TGGGGAAAAC TACTTTTGTC AACATTATTC GATATGCAAT TCTTGGGTTA TACAAAAAGC CTTTCGGATA TACTCGTACA TACCAAGGAA ATATTATAGA AAAACGCCAA CTGTTTCCGC AAAAGTATTT CAGCAATCGC ATGGATGACA GCATTCACAC GGATGCTTCT CCTACCGTAT CAATTAGCAT GAAGATAAAC AATGTTACAG TTGATTTGAC AAGAGATTTA TCCTCCATAA CCTTAACCAA ACTTAAGGTT GATGGAACAG AAGTATTTGG CACCTTAATC AATCAGTTTA GCTACGAAAA ATTATCTGAT GCTGCAAAAG TTAATATGTT GCCTTATCTA TATGAGAAAA TCATTAAGAC TAATACAAAT TTAGAATTTG ATGATTTAAT ATTTTTCGTA AACGAGGTAC TTTTTTTCGG AGAAGACCAC AAGACCATCC TTTGGAATGA TGGTGGCTTC TTCCCTGATG TACAAAGCGA ACTATTTAAC AAATATTTCA ATGACCCTGT TCTCGACAAG AAACGGCAAG AAGCTATTAG AAAAGCTAAA TATTTTGATA GTTTGTCTCG TCATAGTTCA GAAGACATGA GAGCTATTAA TAAGGTTCTT GGCAAAATGA AGGATACTTC TCCGTCAGCC GACCACTCAA CAGCTAATCA AGGGAACACT GCACTTATTC TTATTGATTT AAAGGGAAAG CTTGCAGGAA TGGACGCCAA ACTGGCATCC ATACAAAAAG AACGTGCTTC TAAAAGTCAA GACATATCAC TATTGCAGAA TGAAATCAAC AAAATAAGTT TATCTGCAAA TGATATGGAT AAACAGTTAA AACAAATAGA GGAGCAACTA AATAACCATA TATGGGAGAC TCTACATCCT TCATATCATG TTTTCATAAA GAACATTCAG CTGAACCACA TCTGTCCGAT GTGCAATCAG CCAAATGATG AATTGGTTGA AAAAGTTGCA AATGACTCAA ATAGTTGTTT TGCTTGTGGC TCTTCAATTA ATGAAAACAC AGAAACGGAT ACAATATTAA GAAAACGTTT TGATGAGATA AGCACACATA GAAAAACATT ATATCAGTCT ATTAATACCA AGAAGCAGAC AATACAAAAT ATAGAGCAAC AAATCATTAA CTCAGATACA GAGTTTACTA AGATTGAATT GGAAAGAAGA ACGATTCAGC AACAAATCAG GGAACTGGAG TATGAAAATG CTATGTCTGA TAATAGTCAA AATTCCATTC AACCATTCCT AGATGAAGTA AATCGTCTGA CCCAACAAAA AGAGGCATAC CAAAAACAAC GTGACGAGCA GTATAATATC GTGACTTCTA TTTCAAACGA AATAGAAGAT GTTATAACAG CTAATGTTCA TGCGTTTTCC TCGATTTTTG CCCAATACGC AGGAAAGTTT TTAGGTGTAC CTTGCGAGCT GACATACATC AAACAAACTG GAGATACAAA CAAGCGTTTT TATCCTGTTA TTGATGGGAA AGTCCGGTTT TACGAAGAAG AAATGTCAGA ATCACAAAGA TTCTTTGTGG ATCATTCTTT TAGAATGAGT ATTCTTACAT TCTTCTATAG GACTCCGTCT TTTTATATAG TTGAGACACC GGACAGTAGT TTGGATATAT CATACGAAAG GAATGCTGCA AGCGTTTTTG CTGAATTCCT AAAGAAGCCC AACTCATTAA TCATAACATC AAACCTGAAC AATAGTTTAT TTATTGAGCA TTTATTGGAT CAGGAAAATG TTGATCTTGG TATTGTTGGG TTATTGGATA TTGCAAAACA ATCTACTATA CAGAACACAA GTGAGCAATT AAAATCAATC TATCATCATA TTAAAAACAG ATTGGAATTA TGCTAG
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Protein sequence | MSRHIYLPEL LSINIKNYTL YPNGLDYTFD FVKGVNLVLG GNGMGKTTFV NIIRYAILGL YKKPFGYTRT YQGNIIEKRQ LFPQKYFSNR MDDSIHTDAS PTVSISMKIN NVTVDLTRDL SSITLTKLKV DGTEVFGTLI NQFSYEKLSD AAKVNMLPYL YEKIIKTNTN LEFDDLIFFV NEVLFFGEDH KTILWNDGGF FPDVQSELFN KYFNDPVLDK KRQEAIRKAK YFDSLSRHSS EDMRAINKVL GKMKDTSPSA DHSTANQGNT ALILIDLKGK LAGMDAKLAS IQKERASKSQ DISLLQNEIN KISLSANDMD KQLKQIEEQL NNHIWETLHP SYHVFIKNIQ LNHICPMCNQ PNDELVEKVA NDSNSCFACG SSINENTETD TILRKRFDEI STHRKTLYQS INTKKQTIQN IEQQIINSDT EFTKIELERR TIQQQIRELE YENAMSDNSQ NSIQPFLDEV NRLTQQKEAY QKQRDEQYNI VTSISNEIED VITANVHAFS SIFAQYAGKF LGVPCELTYI KQTGDTNKRF YPVIDGKVRF YEEEMSESQR FFVDHSFRMS ILTFFYRTPS FYIVETPDSS LDISYERNAA SVFAEFLKKP NSLIITSNLN NSLFIEHLLD QENVDLGIVG LLDIAKQSTI QNTSEQLKSI YHHIKNRLEL C
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