Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0325 |
Symbol | |
ID | 6275035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 382474 |
End bp | 383769 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642612377 |
Product | hypothetical protein |
Protein accession | YP_001876946 |
Protein GI | 187734834 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.103576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00000188519 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACAAAG ACTATAAATT CATAGATTGC ACAGAAAAAT ACCATTCGGT TATGCAATTT GACAAAAACA AGAATGTTTT TGTACATCGT TGGTACCCTT TTGTGGAAGG ATATTCTAAG GAGTTTATTG AAGACATACT AGGCGAATTA CCTTTTGCGC CAACCTGTGC ATTAGAGCCT TTCTGTGGTA GCGGAACAAC TCCTGTTGAA CTGCAAAACC ACGGAATAAA GTGCTATTCT TTTGAGGTCA GTCCTTTTAT GCATCTCCTA TCAACGGTCA AATTGGGTAG AAAATATAAT GTCGATACCT TTACGTATTA TGTTAAAGCC GTAACAAAGA AGCTGTCACG TACAAGTCGA AATATACGTA AAATAGAATC ATTACCTTTT GGCGATACGA TTGTAAAAAA AGAGCAGAGT AAGAAGTGGA ATTTTCACGA CACTGCTATA GATGGAATAC TTGATGTAAG ACATGCCATT AGAACGATTG TTGATAATGA TGATTATAAG AATTTATTTA CAATCGCATT GGCTTCGATT ATCATTCAAG CAAGCAATAT GTTTCGTAAT GGCAAGTGCT TGTCGTACAA GAAAGGATGG GAAACTAGAA TCTTTAGTAG AAAAGATATT CATAATTTTT TTCTGGACAG ATTAAATTCA ATTTTTACAG AAGATATTAG AATCATTTCC AAACAGAATC CATCTGTACA AAATTCTGAG ATATGCTATT TGGGAGATGT TCGGAAAAAC ATACAACAGG TTCCAGATAG AGAAGTGGAT TTGATTATTA CTTCTCCACC CTATCTAAAC TCCAGAGATT ACACGGATAT TTATATGTTA GAGCTAAAAG TTTTACAATT AATTAACTCT TATGAGGAAC TTCGTGAATT ACGTAAAAAC ACATTACGTT CTCATGTTCA AGTTCCATAT GGAAAAGTCT TTCCGATAGC AAATGAAAGA CTTAAGAATA GCCTTCTAGA GATGTCTAAT AAAGAGTTAA ATACATGGAA TACAGATATT ACAAATATGA TATGTGCCTA TTTTGAGGAT ATGCAATTTT TATTCTCGGA ATTTGCAAAG AAAATGCATA AAGGGGGTGT CATATATTTC AATGTGGCTA ATTCTGCTTA CTATGGAGTT GAAGTTCCTG TTGATTATAT CATTGCTGAC ATAGCAGAAT CTTGTGGATT TAAGGTTCGC GAAATAAGAA AAGCGAGGGA TTTAAAAACC AGCCCACAGC AAAGTGATAA AATCGGCAAA CTAAGAGAAA GTGTAATTGT GATTGATTAC CAGTGA
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Protein sequence | MYKDYKFIDC TEKYHSVMQF DKNKNVFVHR WYPFVEGYSK EFIEDILGEL PFAPTCALEP FCGSGTTPVE LQNHGIKCYS FEVSPFMHLL STVKLGRKYN VDTFTYYVKA VTKKLSRTSR NIRKIESLPF GDTIVKKEQS KKWNFHDTAI DGILDVRHAI RTIVDNDDYK NLFTIALASI IIQASNMFRN GKCLSYKKGW ETRIFSRKDI HNFFLDRLNS IFTEDIRIIS KQNPSVQNSE ICYLGDVRKN IQQVPDREVD LIITSPPYLN SRDYTDIYML ELKVLQLINS YEELRELRKN TLRSHVQVPY GKVFPIANER LKNSLLEMSN KELNTWNTDI TNMICAYFED MQFLFSEFAK KMHKGGVIYF NVANSAYYGV EVPVDYIIAD IAESCGFKVR EIRKARDLKT SPQQSDKIGK LRESVIVIDY Q
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