Gene Amuc_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0325 
Symbol 
ID6275035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp382474 
End bp383769 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content34% 
IMG OID642612377 
Producthypothetical protein 
Protein accessionYP_001876946 
Protein GI187734834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.103576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00000188519 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACAAAG ACTATAAATT CATAGATTGC ACAGAAAAAT ACCATTCGGT TATGCAATTT 
GACAAAAACA AGAATGTTTT TGTACATCGT TGGTACCCTT TTGTGGAAGG ATATTCTAAG
GAGTTTATTG AAGACATACT AGGCGAATTA CCTTTTGCGC CAACCTGTGC ATTAGAGCCT
TTCTGTGGTA GCGGAACAAC TCCTGTTGAA CTGCAAAACC ACGGAATAAA GTGCTATTCT
TTTGAGGTCA GTCCTTTTAT GCATCTCCTA TCAACGGTCA AATTGGGTAG AAAATATAAT
GTCGATACCT TTACGTATTA TGTTAAAGCC GTAACAAAGA AGCTGTCACG TACAAGTCGA
AATATACGTA AAATAGAATC ATTACCTTTT GGCGATACGA TTGTAAAAAA AGAGCAGAGT
AAGAAGTGGA ATTTTCACGA CACTGCTATA GATGGAATAC TTGATGTAAG ACATGCCATT
AGAACGATTG TTGATAATGA TGATTATAAG AATTTATTTA CAATCGCATT GGCTTCGATT
ATCATTCAAG CAAGCAATAT GTTTCGTAAT GGCAAGTGCT TGTCGTACAA GAAAGGATGG
GAAACTAGAA TCTTTAGTAG AAAAGATATT CATAATTTTT TTCTGGACAG ATTAAATTCA
ATTTTTACAG AAGATATTAG AATCATTTCC AAACAGAATC CATCTGTACA AAATTCTGAG
ATATGCTATT TGGGAGATGT TCGGAAAAAC ATACAACAGG TTCCAGATAG AGAAGTGGAT
TTGATTATTA CTTCTCCACC CTATCTAAAC TCCAGAGATT ACACGGATAT TTATATGTTA
GAGCTAAAAG TTTTACAATT AATTAACTCT TATGAGGAAC TTCGTGAATT ACGTAAAAAC
ACATTACGTT CTCATGTTCA AGTTCCATAT GGAAAAGTCT TTCCGATAGC AAATGAAAGA
CTTAAGAATA GCCTTCTAGA GATGTCTAAT AAAGAGTTAA ATACATGGAA TACAGATATT
ACAAATATGA TATGTGCCTA TTTTGAGGAT ATGCAATTTT TATTCTCGGA ATTTGCAAAG
AAAATGCATA AAGGGGGTGT CATATATTTC AATGTGGCTA ATTCTGCTTA CTATGGAGTT
GAAGTTCCTG TTGATTATAT CATTGCTGAC ATAGCAGAAT CTTGTGGATT TAAGGTTCGC
GAAATAAGAA AAGCGAGGGA TTTAAAAACC AGCCCACAGC AAAGTGATAA AATCGGCAAA
CTAAGAGAAA GTGTAATTGT GATTGATTAC CAGTGA
 
Protein sequence
MYKDYKFIDC TEKYHSVMQF DKNKNVFVHR WYPFVEGYSK EFIEDILGEL PFAPTCALEP 
FCGSGTTPVE LQNHGIKCYS FEVSPFMHLL STVKLGRKYN VDTFTYYVKA VTKKLSRTSR
NIRKIESLPF GDTIVKKEQS KKWNFHDTAI DGILDVRHAI RTIVDNDDYK NLFTIALASI
IIQASNMFRN GKCLSYKKGW ETRIFSRKDI HNFFLDRLNS IFTEDIRIIS KQNPSVQNSE
ICYLGDVRKN IQQVPDREVD LIITSPPYLN SRDYTDIYML ELKVLQLINS YEELRELRKN
TLRSHVQVPY GKVFPIANER LKNSLLEMSN KELNTWNTDI TNMICAYFED MQFLFSEFAK
KMHKGGVIYF NVANSAYYGV EVPVDYIIAD IAESCGFKVR EIRKARDLKT SPQQSDKIGK
LRESVIVIDY Q