| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0323 |
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| Symbol | |
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| ID | 6275037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 380436 |
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| End bp | 380756 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642612376 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_001876945 |
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| Protein GI | 187734833 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.60456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0221102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCTAT ATACCCTTCT TCAAGCAACT CTCTCCGACC CCAACTCTCC CAACATTGTT
CTCAATGTCA CCCTCGCTGA CCTCCATCAG CTTGTGGTTG ACACCATCGA CGCTACTCGC
GAGCGTCTTC TCCCCATCCT CATGAAAGCC GAGGAAGACC GTCTGCTCAC CAAGAAAGAG
GTGTACGCCC AACTCGGCAT AGGAGAAACC TCCGTCTGGA ATTTCACCAA ACGCGGTAAA
CTCACCCCTG TCAAAGTGAA CAACAGTGTC CGTTATCGCC AGAGTGAGGT ATCCGATATT
CTCAACTCTA AAAATGACTG A
|
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| Protein sequence | MNLYTLLQAT LSDPNSPNIV LNVTLADLHQ LVVDTIDATR ERLLPILMKA EEDRLLTKKE
VYAQLGIGET SVWNFTKRGK LTPVKVNNSV RYRQSEVSDI LNSKND
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