Gene Amuc_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0302 
Symbol 
ID6275093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp359129 
End bp359413 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content52% 
IMG OID642612356 
ProductRibosomal protein L25/L23 
Protein accessionYP_001876925 
Protein GI187734813 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.055916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA TTTACCAAGT CATCAAGAAG GTGCGCATCA GCGAAAAGGC CACCATGCTC 
CAGGAAACTA CCGGCGAGCT GGTCTTCGAA GTTGATCGTG ACGCCAACAA AATCGAAATC
AAAAAGGCTG TCGAAGTTGC TTTCGGCAAG AAGGTCGCAT CCGTGCGTAC CGCCAACTAT
GACGGCAAGC TCAAGCGCCA GCGCCGCTCT GATGCAGGTC GCACCGCTCA TTGGAAAAAA
GCTTACGTCA AGCTTGCCAA CGGTGAAACC CTTGACCTCG TTTAA
 
Protein sequence
MKDIYQVIKK VRISEKATML QETTGELVFE VDRDANKIEI KKAVEVAFGK KVASVRTANY 
DGKLKRQRRS DAGRTAHWKK AYVKLANGET LDLV