Gene Amuc_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0300 
Symbol 
ID6275099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp357961 
End bp358230 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content54% 
IMG OID642612354 
Productribosomal protein S19 
Protein accessionYP_001876923 
Protein GI187734811 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0185] Ribosomal protein S19 
TIGRFAM ID[TIGR01050] ribosomal protein S19, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.373495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGTT CTCTCAAAAA AGGCCCTTTT GTCAGCCAAA AGCTTCTCGC CAAGATCGAC 
GCTCAGCTTG AATCCGGCGA CCGCAAGCCG ATCAAGACCT GGAGCCGCGC ATCCATGATT
ACGCCTGACT TCGTCGGCCT GACTTTCCTG GTGCACGCCG GCAAGAACTT TGCCACCGTG
TACGTCACGG AAAACATGGT AGGCCACAAG CTTGGTGAAT TTGCCCCGAC TCGTGTCTTC
AAACAGCACG GCGGTATCGG TAAGAAGTAA
 
Protein sequence
MGRSLKKGPF VSQKLLAKID AQLESGDRKP IKTWSRASMI TPDFVGLTFL VHAGKNFATV 
YVTENMVGHK LGEFAPTRVF KQHGGIGKK