Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0297 |
Symbol | |
ID | 6275111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 356124 |
End bp | 356813 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642612351 |
Product | ribosomal protein S3 |
Protein accession | YP_001876920 |
Protein GI | 187734808 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.888515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGA AAGTAAATCC AATCGGGTTC CGCCTCGCCG TCAACAAGGA CTGGCGCTCC AAGTGGTACG CCACGGGCCA GGATTACGCC ACCAAGCTGC ATGAAGACTT GGTGATGCGC AAGTACATCA AGGAACAGTT GATGTCCGCC GCCGTTTCCA GCATCGTGAT TGAACGCGCC TGGAACAGTG TCCGCATCAC CGTCCACACT GCCCGTCCGG GGCTTGTCAT TGGCCGCAAG GGTGAGGAAA TTGAAAAGAT CCGCCAGTAC CTCCAGGGCC TGTGCGGCGC TTCCACCCAG GTCAACATTG ACATTGTGGA AATCCGTTCC CCTGAAACGG ACGCCCAGCT TATTGCAGAG AACGTGGCTG TTCAACTGGA ACGCCGCGTT TCCTTCCGCC GCGCCATGAA GCGCGCCGTG CAGGTTGCCA TGGAACGCGG GGCCGACGGC ATCCGCATCC GCTGCGCCGG CCGTCTTGGC GGGGCTGACA TTGCCCGTGC CGAATGGTAC CGCGAAGGCA AGGTGCCGTT GCAGACGCTC CGCACTCCGA TTGACTACGG CTTTGCCGAA GCCCGTACCC TGTACGGCAT CATCGGTGTG AAGTGCTGGG TCAACAAGCG CGATGAAGTC GTCTCCCAGC AGAATTCCCG TCCGTCCGGC CCTCGCGGAC CCCGTCGTCC GCGCGCCTAA
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Protein sequence | MGQKVNPIGF RLAVNKDWRS KWYATGQDYA TKLHEDLVMR KYIKEQLMSA AVSSIVIERA WNSVRITVHT ARPGLVIGRK GEEIEKIRQY LQGLCGASTQ VNIDIVEIRS PETDAQLIAE NVAVQLERRV SFRRAMKRAV QVAMERGADG IRIRCAGRLG GADIARAEWY REGKVPLQTL RTPIDYGFAE ARTLYGIIGV KCWVNKRDEV VSQQNSRPSG PRGPRRPRA
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