Gene Amuc_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0276 
Symbol 
ID6275175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp336643 
End bp337776 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content57% 
IMG OID642612330 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_001876899 
Protein GI187734787 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000356589 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTA TACTTCATCA GAAAGATTCC TCCACGGCTG CGCGCCTGGG GTCGCTTGAG 
TTGCCGCATG GACGGGTTCC CACCCCCATT TTCATGCCGG TGGGAACGCA GGGTTCCGTG
AAAACCATGC ATCCGCAGGA TTTGGAGATG CTGGGAGCTG AGATTATTCT GGGAAATACC
TATCATTTGT CCCTGCGCCC CGGTTCCGCT TTAATTAGGC AAATGGGCGG ATTACACAAA
TTTTCCTCCT GGAACCGCCC TATTTTGACG GATTCCGGCG GGTTCCAGGT CTGGTCTCTT
GCCAAGCTCC GTAAAATTAC GGAAGAAGGG GTGCGTTTCC AGAACCATTT GGACGGGGCG
TACATGATGC TGAGCCCGGA GCGGTCCATG GAGATCCAGG CGGACCTGGG CAGTGATATC
GCCATGCTAT TTGACGAGTG CCCCCCTTAT CCCTGCGACA GGAAGTACGC GGAAGCCTCC
CTGGGGTACA CGCTTCGTTG GGCCCGCCGC TGCAAGGCGT GGGTGCAGGA ACATCGCCCC
CGTTCCGGGG AAGGGCGTCA GCACCATTTC GGTATTGTGC AGGGTTCCGT GTATGCGGAT
TTAAGAAAGA AGTGCGCGGA AGAACTGGCC GCCATGGATT TTGACGGGTA CGCCATCGGC
GGCGTTTCCG TGGGAGAGCC GGAGGATGAA ATGCTCCGCG CCATTGATCA TTCCGCTCCC
TGGCTGCCGG AGGAGAAGCC CCGGTACGCC ATGGGGCTGG GCACCCCCCC CCAATTGCTG
GAAATGGTTG CCCGCGGCGT GGATATGTTT GACTGCGTAA TGCCTACCCG CCTGGCTCGC
CACGGCGTGG CGCTGACTCC GGACGGCCCC ATGCATATCA AGAATCAGCG CTGGGCGACG
GATTCCCGCC CAATTGACCC GGAGGGACAT CCGCATGTCA CGCAATTTTC CCGCGCTTAC
GTGCGGCATT TGTTTAAAGC CGGTGAAATA CTCGCTTTAA GATTGCTTTC TTTTCAGAAT
CTGGAATTCT ATCTCCGGCT GATGGCCCAG GCGCGCGAGG CCATAGCCGC CGGCACGTTC
GGTCCCTTCA AGGATTCGTT TATCGCGCGG TATAAAGCAA ACGACATTTT ATGA
 
Protein sequence
MPFILHQKDS STAARLGSLE LPHGRVPTPI FMPVGTQGSV KTMHPQDLEM LGAEIILGNT 
YHLSLRPGSA LIRQMGGLHK FSSWNRPILT DSGGFQVWSL AKLRKITEEG VRFQNHLDGA
YMMLSPERSM EIQADLGSDI AMLFDECPPY PCDRKYAEAS LGYTLRWARR CKAWVQEHRP
RSGEGRQHHF GIVQGSVYAD LRKKCAEELA AMDFDGYAIG GVSVGEPEDE MLRAIDHSAP
WLPEEKPRYA MGLGTPPQLL EMVARGVDMF DCVMPTRLAR HGVALTPDGP MHIKNQRWAT
DSRPIDPEGH PHVTQFSRAY VRHLFKAGEI LALRLLSFQN LEFYLRLMAQ AREAIAAGTF
GPFKDSFIAR YKANDIL