Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0276 |
Symbol | |
ID | 6275175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 336643 |
End bp | 337776 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642612330 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_001876899 |
Protein GI | 187734787 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000356589 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTTA TACTTCATCA GAAAGATTCC TCCACGGCTG CGCGCCTGGG GTCGCTTGAG TTGCCGCATG GACGGGTTCC CACCCCCATT TTCATGCCGG TGGGAACGCA GGGTTCCGTG AAAACCATGC ATCCGCAGGA TTTGGAGATG CTGGGAGCTG AGATTATTCT GGGAAATACC TATCATTTGT CCCTGCGCCC CGGTTCCGCT TTAATTAGGC AAATGGGCGG ATTACACAAA TTTTCCTCCT GGAACCGCCC TATTTTGACG GATTCCGGCG GGTTCCAGGT CTGGTCTCTT GCCAAGCTCC GTAAAATTAC GGAAGAAGGG GTGCGTTTCC AGAACCATTT GGACGGGGCG TACATGATGC TGAGCCCGGA GCGGTCCATG GAGATCCAGG CGGACCTGGG CAGTGATATC GCCATGCTAT TTGACGAGTG CCCCCCTTAT CCCTGCGACA GGAAGTACGC GGAAGCCTCC CTGGGGTACA CGCTTCGTTG GGCCCGCCGC TGCAAGGCGT GGGTGCAGGA ACATCGCCCC CGTTCCGGGG AAGGGCGTCA GCACCATTTC GGTATTGTGC AGGGTTCCGT GTATGCGGAT TTAAGAAAGA AGTGCGCGGA AGAACTGGCC GCCATGGATT TTGACGGGTA CGCCATCGGC GGCGTTTCCG TGGGAGAGCC GGAGGATGAA ATGCTCCGCG CCATTGATCA TTCCGCTCCC TGGCTGCCGG AGGAGAAGCC CCGGTACGCC ATGGGGCTGG GCACCCCCCC CCAATTGCTG GAAATGGTTG CCCGCGGCGT GGATATGTTT GACTGCGTAA TGCCTACCCG CCTGGCTCGC CACGGCGTGG CGCTGACTCC GGACGGCCCC ATGCATATCA AGAATCAGCG CTGGGCGACG GATTCCCGCC CAATTGACCC GGAGGGACAT CCGCATGTCA CGCAATTTTC CCGCGCTTAC GTGCGGCATT TGTTTAAAGC CGGTGAAATA CTCGCTTTAA GATTGCTTTC TTTTCAGAAT CTGGAATTCT ATCTCCGGCT GATGGCCCAG GCGCGCGAGG CCATAGCCGC CGGCACGTTC GGTCCCTTCA AGGATTCGTT TATCGCGCGG TATAAAGCAA ACGACATTTT ATGA
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Protein sequence | MPFILHQKDS STAARLGSLE LPHGRVPTPI FMPVGTQGSV KTMHPQDLEM LGAEIILGNT YHLSLRPGSA LIRQMGGLHK FSSWNRPILT DSGGFQVWSL AKLRKITEEG VRFQNHLDGA YMMLSPERSM EIQADLGSDI AMLFDECPPY PCDRKYAEAS LGYTLRWARR CKAWVQEHRP RSGEGRQHHF GIVQGSVYAD LRKKCAEELA AMDFDGYAIG GVSVGEPEDE MLRAIDHSAP WLPEEKPRYA MGLGTPPQLL EMVARGVDMF DCVMPTRLAR HGVALTPDGP MHIKNQRWAT DSRPIDPEGH PHVTQFSRAY VRHLFKAGEI LALRLLSFQN LEFYLRLMAQ AREAIAAGTF GPFKDSFIAR YKANDIL
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