| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0273 |
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| Symbol | |
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| ID | 6275183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 334425 |
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| End bp | 335327 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642612327 |
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| Product | tyrosine recombinase XerC |
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| Protein accession | YP_001876896 |
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| Protein GI | 187734784 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.007038 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.809464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAGGA TTCCTCTGGA ACCGGAACAG GACTTTCTTC AATATCTGGA GGTGGAAAAG
CAGGCTTCTC CTCATACGGT GGAGGTGTAC GCCCGCGCCT TGCGCCAGTT CAGGGCCTGG
GCGGCTGATT CATTCCCAGG GTGGGAGAAT TGTACGCCGG ACCAGATGAG GGACTGGCTT
TTCCAGGAGC TGAAGGATGA AGCCGCCACG TCTTCCATCC GGCTGAGGTT TGCCGCCTTG
CGCAGTTTTT ACCGTTTCAT GATGCGGAGG CACGGGCTGG AGACGAATCC GATGACGGGC
GTTTCCCTTC CCAGAAGGAA AAAAACGCTT CCCGTTTTCC TGACACTCAA CCAGATGTTG
GAATTGTTGG AGCTTCCCTA CAAGACGGCC GTTCCCGCCA ATGCTCCCGC ATGGCTTCCC
TACCGTGATG CCGCCATATT GGAACTTTTT TATTCCTGCG GGATGCGCCT GAGTGAATTA
GTAGGGCTGG ATGTCGGCAG TGTGGACCAC CGTTTCCGGG GCGTGAAGGT AATGGGGAAG
GGGCGCAAGG AGCGCATCCT GCCTGTGGGA ACTCCTGCTC TGGCTGCTCT GGAAACTTAT
GTTTCCATGG CCTGTCTGCC GAAGAATTCC CCCTTGTTTG TCTCCCGTAT AGGAACCCGG
TTAAGCGCTC GCTCCGTGCA GATGATGCTG AACAAATATG TGAAGCTGTC TTCCATTCCT
TTTACCATTT CTCCCCATAA GATCAGGCAT ACATTCGCCA CGCACATTCT GGAGGCAGGG
GCGGATCTCC GTTCCGTCCA GGAACTGCTG GGCCATGCTT CCTTATCCAC TACCCAGATT
TACACGCATG TGACGCGTGC CAGAATGGCG GAAGTTTACA GACAGGCGCA TCCCAGGGCA
TAA
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| Protein sequence | MMRIPLEPEQ DFLQYLEVEK QASPHTVEVY ARALRQFRAW AADSFPGWEN CTPDQMRDWL
FQELKDEAAT SSIRLRFAAL RSFYRFMMRR HGLETNPMTG VSLPRRKKTL PVFLTLNQML
ELLELPYKTA VPANAPAWLP YRDAAILELF YSCGMRLSEL VGLDVGSVDH RFRGVKVMGK
GRKERILPVG TPALAALETY VSMACLPKNS PLFVSRIGTR LSARSVQMML NKYVKLSSIP
FTISPHKIRH TFATHILEAG ADLRSVQELL GHASLSTTQI YTHVTRARMA EVYRQAHPRA
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