Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0262 |
Symbol | |
ID | 6275219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 325501 |
End bp | 326127 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642612316 |
Product | hypothetical protein |
Protein accession | YP_001876886 |
Protein GI | 187734774 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0349236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.497512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGACG ACGATATACG CATTTTGGTG AAGGAGTGGC TACAAAGCCA AAACCGCAAG TCCTATCAAT TGGCGGAGGA GATAGGCATC CGGCCGCAAA CTTTTTACGC ACAGATGAGC GTTCGTAAAA TATCGGCCAA TACCAAAAAA GCGCTTTCCC GCATCATTCC AGGCCTGGTT TCCGATTCAG ATCTGAATCC ACCTTCCAAT ACGGAAGAAT GTGACCCGAA AAAACTCAGA ATCAAGGAAT GGCTCCGGGC TCACGGCAAA ACACGCCGAT GGCTTGCGGA ACAATGCCGC GTTTCCGTCC GCACCGTACA TACCTGGTTT ACTGCACGCG GTAACATTCC TGTCACCCAA TATCTCTTTA TCGATAAGCT GATGAGTGAA GGCGAGTCGT GGAAAGTTCA GCTTCCCAAT ACCATTCCCG TGAATTTTCC GGAAACGGAA ATGGAAATTG TTCACAAATT CCAGAAACTA CATCCGGACA TAGATCTTCC TATGTACGGC ATGCATAAAA TCCTGGAGTT ATGCGTTAAT GTACTCACTC AGGATGAATA TTCAAAGACG TCTCCATACT CCCGTATTAC CAATACCGGA GAGATTCGCC ACCGCCGGAT AAAATAA
|
Protein sequence | MSDDDIRILV KEWLQSQNRK SYQLAEEIGI RPQTFYAQMS VRKISANTKK ALSRIIPGLV SDSDLNPPSN TEECDPKKLR IKEWLRAHGK TRRWLAEQCR VSVRTVHTWF TARGNIPVTQ YLFIDKLMSE GESWKVQLPN TIPVNFPETE MEIVHKFQKL HPDIDLPMYG MHKILELCVN VLTQDEYSKT SPYSRITNTG EIRHRRIK
|
| |