Gene Amuc_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0262 
Symbol 
ID6275219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp325501 
End bp326127 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content47% 
IMG OID642612316 
Producthypothetical protein 
Protein accessionYP_001876886 
Protein GI187734774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0349236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.497512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACG ACGATATACG CATTTTGGTG AAGGAGTGGC TACAAAGCCA AAACCGCAAG 
TCCTATCAAT TGGCGGAGGA GATAGGCATC CGGCCGCAAA CTTTTTACGC ACAGATGAGC
GTTCGTAAAA TATCGGCCAA TACCAAAAAA GCGCTTTCCC GCATCATTCC AGGCCTGGTT
TCCGATTCAG ATCTGAATCC ACCTTCCAAT ACGGAAGAAT GTGACCCGAA AAAACTCAGA
ATCAAGGAAT GGCTCCGGGC TCACGGCAAA ACACGCCGAT GGCTTGCGGA ACAATGCCGC
GTTTCCGTCC GCACCGTACA TACCTGGTTT ACTGCACGCG GTAACATTCC TGTCACCCAA
TATCTCTTTA TCGATAAGCT GATGAGTGAA GGCGAGTCGT GGAAAGTTCA GCTTCCCAAT
ACCATTCCCG TGAATTTTCC GGAAACGGAA ATGGAAATTG TTCACAAATT CCAGAAACTA
CATCCGGACA TAGATCTTCC TATGTACGGC ATGCATAAAA TCCTGGAGTT ATGCGTTAAT
GTACTCACTC AGGATGAATA TTCAAAGACG TCTCCATACT CCCGTATTAC CAATACCGGA
GAGATTCGCC ACCGCCGGAT AAAATAA
 
Protein sequence
MSDDDIRILV KEWLQSQNRK SYQLAEEIGI RPQTFYAQMS VRKISANTKK ALSRIIPGLV 
SDSDLNPPSN TEECDPKKLR IKEWLRAHGK TRRWLAEQCR VSVRTVHTWF TARGNIPVTQ
YLFIDKLMSE GESWKVQLPN TIPVNFPETE MEIVHKFQKL HPDIDLPMYG MHKILELCVN
VLTQDEYSKT SPYSRITNTG EIRHRRIK