Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0247 |
Symbol | |
ID | 6275266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 304260 |
End bp | 305948 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642612295 |
Product | ribosomal protein S1 |
Protein accession | YP_001876871 |
Protein GI | 187734759 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAA CTGAACTGGC GGAACTTATT GACAGCAAGT TCCGCGAATT GCGTGAAGGT TCCATTGTTA CCGGAACCAT CCAAGAAATC CGTCCCCAAG TCGTTTTGGT GGACATCGGC TACAAGTCCG AAGGCGCTAT TTCCATTTCC GAGTTTGAAG ACGAGGAAAT CGAAGTGGGG GACCAAATTG AAGTCCTTTT GGAACGCCTC GAAAACGACG AAGGCATCGT CGTCCTTTCC AAGGAAAAGG CCGCCCATAA GCAGAACTGG GATAAGATCG TGGGCGTGTA CCGCGATGGC GGCCTGGTTA AGGGTAAAGT GAAGAGCGTC GTCAAGGGCG GTCTTATGGT CAATGTTGGC GTGGAAGCTT TCCTGCCCGG TTCCCAGGTG GATATTATTC CTCCTCGCGA CCTGAACGAG TATGTTGGAA AAGTTTACGA ATTTAAGATC GTCAAGGTAA ATGACGACCG TAAAAATATC GTCCTTTCCC GCCGTGAGGT GATTGAAGCC GAACGCGCCG ACCAGCGCCA GCGCTTCCTT GAAACCGTCA AGGAAGGCGA CAAGGTGGAA GGTATCGTGA AGAATATCAC GGACTTCGGC GCTTTTGTCG ACCTCCGCGG CATGGACGGC CTGCTCCATA TCACGGATAT GAGCTGGGGC CGCGTGAACC ATCCGAGCGA AATGCTCCAT ATCGGTCAGT CCCTGGAAGT CGTGATTCTG GAAGTGGATC GCGAAAAGGA ACGCGTTTCC CTGGGCCTGA AGCAGATGAC AGACAACCCC TGGGCGGATA TCGAACGCAA ATACCCGATC AATTCCCATG TCAAGGGCCG CGTGACCAAG CTCCTGCCTT ACGGCGCCTT TGTGGAATTG GAAAAGGGCG TGGAAGGCCT AGTGCACGTT TCCGAATTGT CCTGGGTCAA GAGAATCACC CGTCCGAGCG ATGTATTGAA GCTGGACCAG GAAATCGAAG CCGTGGTTCT TTCCATTTCT GTGAAGGAAC AGAAGATTTC CCTCGGTGTC CGCCAGTTGG AAGACAATCC CTGGGCGGAT ATCGAATCCC GTTTCCCGAT TGGTACCGTC ATCAAGGGCC AGGTTCGCAA CCTTACTCCC TACGGCGCTT TTGTGGGACT GGAAGAAGGC ATCGACGGCA TGATCCACGT GTCCGATATG AGCTGGACCC GCAAGATCAA TCATCCCTCC GAAGTTCTCA AGAAGGGCGA CGAAGTGGAA GCCATCGTTT TGGAAATCAA GAAGGAGGAT CAGCGCGTCT CCCTTGGTAT CAAGCAGCTT GAGTCCGATC CGTGGGAATC CATCAATGAC CGCTTCAAGG TGGGCGATAT GGTGACTGGC CAGGTGGCCA AGATTGCCAG CTTCGGCGCC TTTGTGAATC TGGACGGCGA TATTGACGGC CTGATTCATA TCTCCCAGTT GAGCGAAGAC CATGTGGAAC GCGTGAAGGA TGTGATCAAG GTGGGTGATG AAATCACTGC CCGCGTGATC AAAGTGGACA GCATCGAACG CCGTATCGGC CTTTCCATCA AGGCCGTCAA TTACGACACC GAACAGCTCC GCCGCGAAAC CGCTTCCTTT GAAGCCCTCC GCCCGAGCAG CGATATGGTG GGTCTGGAAC ACGCCTTCAA TCTGGCTACC CGTGAAAACG AAGAGTGGAG CCCTTCTGAA GAGAAGTAA
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Protein sequence | MSTTELAELI DSKFRELREG SIVTGTIQEI RPQVVLVDIG YKSEGAISIS EFEDEEIEVG DQIEVLLERL ENDEGIVVLS KEKAAHKQNW DKIVGVYRDG GLVKGKVKSV VKGGLMVNVG VEAFLPGSQV DIIPPRDLNE YVGKVYEFKI VKVNDDRKNI VLSRREVIEA ERADQRQRFL ETVKEGDKVE GIVKNITDFG AFVDLRGMDG LLHITDMSWG RVNHPSEMLH IGQSLEVVIL EVDREKERVS LGLKQMTDNP WADIERKYPI NSHVKGRVTK LLPYGAFVEL EKGVEGLVHV SELSWVKRIT RPSDVLKLDQ EIEAVVLSIS VKEQKISLGV RQLEDNPWAD IESRFPIGTV IKGQVRNLTP YGAFVGLEEG IDGMIHVSDM SWTRKINHPS EVLKKGDEVE AIVLEIKKED QRVSLGIKQL ESDPWESIND RFKVGDMVTG QVAKIASFGA FVNLDGDIDG LIHISQLSED HVERVKDVIK VGDEITARVI KVDSIERRIG LSIKAVNYDT EQLRRETASF EALRPSSDMV GLEHAFNLAT RENEEWSPSE EK
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