| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0247 |
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| Symbol | |
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| ID | 6275266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 304260 |
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| End bp | 305948 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642612295 |
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| Product | ribosomal protein S1 |
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| Protein accession | YP_001876871 |
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| Protein GI | 187734759 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAA CTGAACTGGC GGAACTTATT GACAGCAAGT TCCGCGAATT GCGTGAAGGT
TCCATTGTTA CCGGAACCAT CCAAGAAATC CGTCCCCAAG TCGTTTTGGT GGACATCGGC
TACAAGTCCG AAGGCGCTAT TTCCATTTCC GAGTTTGAAG ACGAGGAAAT CGAAGTGGGG
GACCAAATTG AAGTCCTTTT GGAACGCCTC GAAAACGACG AAGGCATCGT CGTCCTTTCC
AAGGAAAAGG CCGCCCATAA GCAGAACTGG GATAAGATCG TGGGCGTGTA CCGCGATGGC
GGCCTGGTTA AGGGTAAAGT GAAGAGCGTC GTCAAGGGCG GTCTTATGGT CAATGTTGGC
GTGGAAGCTT TCCTGCCCGG TTCCCAGGTG GATATTATTC CTCCTCGCGA CCTGAACGAG
TATGTTGGAA AAGTTTACGA ATTTAAGATC GTCAAGGTAA ATGACGACCG TAAAAATATC
GTCCTTTCCC GCCGTGAGGT GATTGAAGCC GAACGCGCCG ACCAGCGCCA GCGCTTCCTT
GAAACCGTCA AGGAAGGCGA CAAGGTGGAA GGTATCGTGA AGAATATCAC GGACTTCGGC
GCTTTTGTCG ACCTCCGCGG CATGGACGGC CTGCTCCATA TCACGGATAT GAGCTGGGGC
CGCGTGAACC ATCCGAGCGA AATGCTCCAT ATCGGTCAGT CCCTGGAAGT CGTGATTCTG
GAAGTGGATC GCGAAAAGGA ACGCGTTTCC CTGGGCCTGA AGCAGATGAC AGACAACCCC
TGGGCGGATA TCGAACGCAA ATACCCGATC AATTCCCATG TCAAGGGCCG CGTGACCAAG
CTCCTGCCTT ACGGCGCCTT TGTGGAATTG GAAAAGGGCG TGGAAGGCCT AGTGCACGTT
TCCGAATTGT CCTGGGTCAA GAGAATCACC CGTCCGAGCG ATGTATTGAA GCTGGACCAG
GAAATCGAAG CCGTGGTTCT TTCCATTTCT GTGAAGGAAC AGAAGATTTC CCTCGGTGTC
CGCCAGTTGG AAGACAATCC CTGGGCGGAT ATCGAATCCC GTTTCCCGAT TGGTACCGTC
ATCAAGGGCC AGGTTCGCAA CCTTACTCCC TACGGCGCTT TTGTGGGACT GGAAGAAGGC
ATCGACGGCA TGATCCACGT GTCCGATATG AGCTGGACCC GCAAGATCAA TCATCCCTCC
GAAGTTCTCA AGAAGGGCGA CGAAGTGGAA GCCATCGTTT TGGAAATCAA GAAGGAGGAT
CAGCGCGTCT CCCTTGGTAT CAAGCAGCTT GAGTCCGATC CGTGGGAATC CATCAATGAC
CGCTTCAAGG TGGGCGATAT GGTGACTGGC CAGGTGGCCA AGATTGCCAG CTTCGGCGCC
TTTGTGAATC TGGACGGCGA TATTGACGGC CTGATTCATA TCTCCCAGTT GAGCGAAGAC
CATGTGGAAC GCGTGAAGGA TGTGATCAAG GTGGGTGATG AAATCACTGC CCGCGTGATC
AAAGTGGACA GCATCGAACG CCGTATCGGC CTTTCCATCA AGGCCGTCAA TTACGACACC
GAACAGCTCC GCCGCGAAAC CGCTTCCTTT GAAGCCCTCC GCCCGAGCAG CGATATGGTG
GGTCTGGAAC ACGCCTTCAA TCTGGCTACC CGTGAAAACG AAGAGTGGAG CCCTTCTGAA
GAGAAGTAA
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| Protein sequence | MSTTELAELI DSKFRELREG SIVTGTIQEI RPQVVLVDIG YKSEGAISIS EFEDEEIEVG
DQIEVLLERL ENDEGIVVLS KEKAAHKQNW DKIVGVYRDG GLVKGKVKSV VKGGLMVNVG
VEAFLPGSQV DIIPPRDLNE YVGKVYEFKI VKVNDDRKNI VLSRREVIEA ERADQRQRFL
ETVKEGDKVE GIVKNITDFG AFVDLRGMDG LLHITDMSWG RVNHPSEMLH IGQSLEVVIL
EVDREKERVS LGLKQMTDNP WADIERKYPI NSHVKGRVTK LLPYGAFVEL EKGVEGLVHV
SELSWVKRIT RPSDVLKLDQ EIEAVVLSIS VKEQKISLGV RQLEDNPWAD IESRFPIGTV
IKGQVRNLTP YGAFVGLEEG IDGMIHVSDM SWTRKINHPS EVLKKGDEVE AIVLEIKKED
QRVSLGIKQL ESDPWESIND RFKVGDMVTG QVAKIASFGA FVNLDGDIDG LIHISQLSED
HVERVKDVIK VGDEITARVI KVDSIERRIG LSIKAVNYDT EQLRRETASF EALRPSSDMV
GLEHAFNLAT RENEEWSPSE EK
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