| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0241 |
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| Symbol | |
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| ID | 6275276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 298195 |
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| End bp | 299637 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642612289 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_001876865 |
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| Protein GI | 187734753 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.381439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTGTT CCGGTATGAA GAAACATTGC AGATGGTGGC TTTTTGCCGG ATTGTGGGGA
CTGTCCCTCG TTCAGCATCC ACTTCTTGCT TCTCAGAATA TTTCCTCTCC GGAGCCTGCC
GGGGAGGGAA ATTTTGAGGC TTACTTGTCC GGTCTCCGCG AAAGAGCTCT GAATGGGGAT
CCAGCTGCCG CCCGGGAGCT GTCTGTGCAT TATGACGTGG AGGGTAATGC TGCGGAAACG
TCCAAATGGA TGTCCGAGTA TGTTTCCTTG GCAGAGAAAA GGGCCAATAA CGGAGATGTG
GATTCCATGC TGGATTTGGG CAAGCTGTTT TATACAGGCA GCCGCCTGTA CCCAAAGAAC
CTGGAAAGGG CCCGGTACTG GTTTACCCGG GCTGCTGACA GCGGTAATGC CGCGGCACAG
TACCAGGTGG CTGTAATGGC TTCCCAGGGA GCAGGAGGAC CGAAGGATGA AGCAACGGCA
GCCCTTTATT ATAAAAAATC TCTCCAGACG TGGAAGAAAG AGGCGGATGA CGGTGATTCC
AAGGCGGCGT TATGGGCTGC CCTTGTTTAT GAACGAAAGC TGGTTCCGGA CAGTTCTCCG
GAAAAGTCAG TCCCATATCT TCTTCAGGCA GCGGAAAGCG GCAACCTGAC AGCACAAGGC
CTTCTGGCAT TTAAGTACCG GGATGGGCTG GGAGTGCCGC AGGATGCGGC CAAGGCCGTA
GAATGGTTTG AGAAAGCGGC CTCCCGTAAA GATTTGGGAG CCGTGATGGA ACTGGGCATA
ATGTTCCGGG ACGGCAAGTA TTTGCCCCCT GACCGGGAAA AGGCCTTCCA TTGGTTTGAA
AAAGGGGCGG AATGGAAGGA TCCGTACAGC ATGGCTGCCC TGGCGGATAT GCTGCTGGAG
GGAACTCCTT CCGCAGAACA GGCGGCCCGG GCCCTGGCTC TGTATCGTGA GGCTGCCGCC
GCCGGTTATT TCCCTGCGGC ACTAAAGGCC GCGGAGCTGC TCCAGAACGG GAAGGGCGGG
GAACTGGATG CGGATGAGGC CTACAGGCTG CTGCGGCGTG TGGCGGATGC TACAGGGGAT
CCCAAGGCCA TGTACATGCT GGCCCAGGTA TATTATACAC GGGGTGATGA GGCTCAGGGA
GATTCCCTGA TGAAAGCATC CGCCCAGGCT GCCTATTTGC CGGCCATGAA CCGCATGGCG
CGTCTCCATC TTCTGCCGGA CAGTTCACTG CCCTGGAATC CGGTTTTATC CTATTATTAT
TGGAACCAGG CTGGAGAAAT GGGGGATGAA AAGGCGGCTT CCGCCGCTTT TTGGCTGTTG
TGGGGCGGCT CAGGCATCTT TTTGCTGGCA ATATTTATTA TTGTCTGGCG TTTTCAGCGT
TTTGCCGCCA GAAGGCTTGC GGAACAGCAG AAACAGGAAC GGGAGGCCTC TGATGACGCA
TGA
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| Protein sequence | MTCSGMKKHC RWWLFAGLWG LSLVQHPLLA SQNISSPEPA GEGNFEAYLS GLRERALNGD
PAAARELSVH YDVEGNAAET SKWMSEYVSL AEKRANNGDV DSMLDLGKLF YTGSRLYPKN
LERARYWFTR AADSGNAAAQ YQVAVMASQG AGGPKDEATA ALYYKKSLQT WKKEADDGDS
KAALWAALVY ERKLVPDSSP EKSVPYLLQA AESGNLTAQG LLAFKYRDGL GVPQDAAKAV
EWFEKAASRK DLGAVMELGI MFRDGKYLPP DREKAFHWFE KGAEWKDPYS MAALADMLLE
GTPSAEQAAR ALALYREAAA AGYFPAALKA AELLQNGKGG ELDADEAYRL LRRVADATGD
PKAMYMLAQV YYTRGDEAQG DSLMKASAQA AYLPAMNRMA RLHLLPDSSL PWNPVLSYYY
WNQAGEMGDE KAASAAFWLL WGGSGIFLLA IFIIVWRFQR FAARRLAEQQ KQEREASDDA
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