Gene Amuc_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0221 
Symbol 
ID6275312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp277742 
End bp279124 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content59% 
IMG OID642612266 
Productanion transporter 
Protein accessionYP_001876845 
Protein GI187734733 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACC GTACTACAGA CACTCCCAAA GGGCACCGCA ATTACATCAT CATTGCGTGT 
GACGTGCTTC TTTTCCTGGC TATGCTCAAG TGGCTTCCCG TAGAGCCGGA GGTGGCCAGG
GGTCTTGCTG TTCTTACCTT TATCGGCATC CTGTGGCTGA CGGAAGCCCT GCACGTAACC
GTAACCTCCC TGCTGGTGCC GGTGCTTGCC ATGTTGATGG GGATTCTGCC GGGGGCGAAG
GCCCTGTCCG GTTTTGCGGA TCCTACCATT TTTCTGTTTT TCGGGGGCTT TGCCCTGGCC
GGGGCTCTCC ACGAACAGAA AATTGATACC TGGCTGGCGG GAAAAATCCT CCGAATGGCC
CGCGGGAGTC TGGGGATGGC TCTGATTCTG ATTTTCCTGG CTACGGCGTT TCTTTCCATG
TGGATGTCCA ATACGGCCAC GGCGGCGATG ATGCTTCCTC TGGTGATCGG CCTTCTGGAC
CGCATTCCGG CGGAAAAACT TAAGACGACG GCTCCTTTTG CTATTCTGGG TGTGGCGTAC
AGCGCCTCCA TCGGCGGTAT GGGGACGCTG GTGGGGTCTC CTCCCAATGC CATTGCGGCG
CATGAACTCG GCATGGGGTT TGCGGAATGG TTCCGGATTG CCATGCCCAT TGTCCTGGTG
TTCGGAGTGA TCGTTTTCTG CCTGATGTAT CTTTTCTTCC GTCCGCGTCT GGGGATGCAT
GTGGATATGA CGCCGGCGGA AGGGGGAGAA ACGGAGGGCA GGTTGAATGC CAGGCAGGTG
CGTGTCCTTA TTCTCTTCGT GCTGGTGGCC GGGAGCTGGA TGTGCAGCAG TTTCCTTTCC
TCTGCTTTGG GCGGCATTCC GTCCATGGAC ACGCTCATCG CGCTGAGTGC TGCGGTGCTG
CTGCCGCTGT GCGGGGTTAT CAACTGGAGC GGCATCGCCA AAAATACGGA CTGGGGCGTC
CTGCTCCTGT TTGGGGGAGG CATCACGCTC AGCAGCATTC TCGTCCAGAC GGGGGCGGCG
GGATTCCTGG CGGACCAGGT ATCTTCTCTC GCCATGGGGC AGAGCCCCAT CGTCATCCTG
CTCATCATCA GCCTCTTCAT TACGTCGCTG ACGGAATTCT GTTCCAATAC GGCCAGTGCG
GCCCTGGTGG CCCCGCTGAT GGTCACGGTA GCCTCCGCCA TGGGCATGTC TGCTACGCCG
CTGGTGCTTC TGGTAGGCAT AGGCGCTTCC TGCGCCTTCA TGCTCCCCGT TTCCACTCCT
CCCAACGCCC TGGCCTTCGC GACGGGAAAA TTCCCTCAGA TGACCATGGT GAAGGTGGGG
CTGCTGATTA ATGTGGTGCT CGTTTTCGTG AAGGCTTTCT GGGCCTGGAT ATTCTGGATG
TAG
 
Protein sequence
MRHRTTDTPK GHRNYIIIAC DVLLFLAMLK WLPVEPEVAR GLAVLTFIGI LWLTEALHVT 
VTSLLVPVLA MLMGILPGAK ALSGFADPTI FLFFGGFALA GALHEQKIDT WLAGKILRMA
RGSLGMALIL IFLATAFLSM WMSNTATAAM MLPLVIGLLD RIPAEKLKTT APFAILGVAY
SASIGGMGTL VGSPPNAIAA HELGMGFAEW FRIAMPIVLV FGVIVFCLMY LFFRPRLGMH
VDMTPAEGGE TEGRLNARQV RVLILFVLVA GSWMCSSFLS SALGGIPSMD TLIALSAAVL
LPLCGVINWS GIAKNTDWGV LLLFGGGITL SSILVQTGAA GFLADQVSSL AMGQSPIVIL
LIISLFITSL TEFCSNTASA ALVAPLMVTV ASAMGMSATP LVLLVGIGAS CAFMLPVSTP
PNALAFATGK FPQMTMVKVG LLINVVLVFV KAFWAWIFWM