| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0219 |
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| Symbol | |
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| ID | 6275314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 273283 |
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| End bp | 274512 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612264 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001876843 |
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| Protein GI | 187734731 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.572479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGA CGGCGACGCC GCCCGGAAAA CCTTCTTTCA ACAAAGGCGC CCGCAGGCGT
GTCATTCCCA GCATGGACTT GACACGCCTG ACGGGCTCTA TCTCCAGCCC CGCCGTTTTC
CTCTTCCTGC TTTCCCTCTT TTTTGCCGGG TGTAAAAAGA CGGAACAGGT TCCGCATGAA
ACGCCCACGC TTATTTATGA ACACCCCGTC ACCATGGATA TTCCGGTGAC GGGCAGCTGG
GTGGGCCACC TGGACGGCGT GGACAACGCC TCCATCGTCC CCCAGATTAC GGGCTACCTT
CAAACGCAGA ATTACGCCAA TGGCGCTATT GTGAAGAAGG GGGAAGTACT CTTCCGCATT
GACGATTCCA CGTTCAGGGA CCAGGTATCC AAGGCCAAAG CCACCCTGGC CCAGGCACAG
GCCCAGCTAC AGCAGTTGAA TTACGACGCG GAAATTTACA GGCCCCTGGC TGCGGAGAAT
GCCATTTCCA AGCAGAAATA CGAGGATACG CGCCTGTCTG CTCTTGCCGC GGAAGCACAG
GTGCAGCAGG CGGCGGCGGC CCTGGCCCTG GCTGAAAAAA ATCTTTCCTA TACGGTGCTG
TACGCGCCTT TTGACGGAAT AGCCGGCATC TCCAGGACAA ACATCGGCGA CCTGGTCAGC
CCGGAAAGCG GCCCGCTTGC CGTCGTCTCC TCCGTCAATC CCATCCGCGT CAATTTCGCC
GTCACCCAGC AGGAATGGAT TCAGCAGGCG GGGAAAAACG GGAATGAAGG CGTCCAGACG
GGCAGCAAGC TGGACATTAC GCTGAAAGAC GGCACCAAAT ACCCGGAACA GGCCACGGTA
GTTGCCATTG ACCGGGCGTT CAATCCCCAG ACAGGCACCA TCCGCGTACA GGCCAACCTT
CCCAATGCGG ACTATCTGCT GCGCCCCGGC ATGTTCATCA TCGCCACGGC CCGGCTGGCC
ACCGTCAAAA ACGCGCTGAC CGTTCCGGCA AAATCCCTTC TTTCGACACA GGGGCGCTTT
TTCGTGATTG TTCTGGACGG GAGCAACCAC CCTTCCATCA TCCCCGTACA GGCCGGGACG
CAGCTTGGAG ACCGGCAGCA GGTTATTCCT CTGAAACCGG ATTCCCTCAC CCCCCAAAGC
AAAGTGGTCG TGGACGGTCT TCTCCAGGCG GAAGCAGCCT CCAGAAATCC GGCCGCCCGC
CTGAAAGCGG TACCCGCCAG CAACCAATAA
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| Protein sequence | MTRTATPPGK PSFNKGARRR VIPSMDLTRL TGSISSPAVF LFLLSLFFAG CKKTEQVPHE
TPTLIYEHPV TMDIPVTGSW VGHLDGVDNA SIVPQITGYL QTQNYANGAI VKKGEVLFRI
DDSTFRDQVS KAKATLAQAQ AQLQQLNYDA EIYRPLAAEN AISKQKYEDT RLSALAAEAQ
VQQAAAALAL AEKNLSYTVL YAPFDGIAGI SRTNIGDLVS PESGPLAVVS SVNPIRVNFA
VTQQEWIQQA GKNGNEGVQT GSKLDITLKD GTKYPEQATV VAIDRAFNPQ TGTIRVQANL
PNADYLLRPG MFIIATARLA TVKNALTVPA KSLLSTQGRF FVIVLDGSNH PSIIPVQAGT
QLGDRQQVIP LKPDSLTPQS KVVVDGLLQA EAASRNPAAR LKAVPASNQ
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