Gene Amuc_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0216 
Symbol 
ID6275317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp267032 
End bp269569 
Gene Length2538 bp 
Protein Length845 aa 
Translation table11 
GC content57% 
IMG OID642612261 
Producthypothetical protein 
Protein accessionYP_001876840 
Protein GI187734728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT TCAAGACAAC CATTGCCATG GCAACCCTGC TGGGCTGCCT GCCCACATCC 
CCCGCAGAAG TCGCCTTTCC GGGGCCTGCT CCCGGAACAG CCAGCGCGGA ACAATCCGCT
TCCGGCTATA CTCTTTCCAA TAACATCCTG ACGGCCAAAT TTATCCTTCG GAACGGAAGT
CTTTCCTTCG GAGGAATGAC TTCCAAACTG GGCCCCGTCG CCAAGGCAGG GGATGAATTA
TTCATCATCA ATCTTCAGGA CGGACGGAGC ATTAAATCCT CCGAGCTGAA AGCGGGAAAC
GTCAAATTCG TCTCCCTTCA GCCCAACCCC AAGGCCTTCA GGCTGGCTGA CCGCTTCCCG
GGAAAAGCCG TCAGCGCAAC ATTCCAGGCT CTGAACGGAA CCCTTCGCAT TTCCTGGCGC
GCCGTGCTCA GGGACCATTC CCATTACCTG AGGCAGGAAC TCCGCCTGGC AAGTATGAAG
CCCGTCCAGA TGAAAAACAT CGTAGCGATG CAATATGACC TGGCAGAAGG GAAAGCCGGG
GCACCCTCCG TTTCCGGAAA CGCCAGAGGA GCACTCATCG TCAATGACCT GGCGTTCACC
GCCCTGGAAA CACCCATGGG CATCAATACC GTGGGAGGCG CCGGAAATAT GGAAGGGGGA
GAAACCGCCA TCTGGAGTGC GGACAAGTGG TCCACAGCTT CATGGACCGG AAATTTCAAT
GTTCCCCAGG AACTGAAAAA GCAGTACGGA GAACAGGTTT CCAGTGCGGA AGGCCCGGTT
TCCATTGACG GCAAAGGAGC CTGCACCGTC ACCTTCCAGT ATAAGGGAGG GGACAAGGGC
AACAATAAGC TGAACCTTGC CGGCGTGCAG CTCCTCTCTT CCAAGGGGGC CGTTCTTGAC
TCCGATTTCC ACAACGGCAG CACCGGAGAT TCCAATGCCG GCAATACTTA CACGGTGCAG
GTTCCCTCCA GGGGAAATTA CATTCTGCGC TACTGGGCCC AGACCAAGAG CGAACCGATT
GCCAGCAAGG GGGAAATCAC CTTTTCCCTG CCCGTGCGCA CGCTGGAGGA AAAGCAGGAA
CCCCAGGCGG ACGAATCCCG GCTGGCCCAG GGACTCTGGA GCCGTAAAAC CACCTTGCAG
CCCGGGGAAA TATGGGACGT ATCCTCCGTT CTCGGAATTT TTGCCCCCGG CCAGAAACGT
CGCTCCTTCC TGGCCTATAT GGAACGGGAA CGCGTGATGC CCTACCGCCC CTTCATCCAT
TATAATTCCT GGTATGAACT GAACATCAAC CGCAACAATG ATTCGGACCC CGCCAAGCGC
ATGACGGAAG AACAATGCCT GGCCGTCCTG AAAGACTGGC AGGAACAGTT TTTCCAGAAG
CGCGGCATGT CCATTGACGC CTTCGTCTGG GACGACGGCT GGGATGAATT CAACAGCCTG
TGGGATTTCC ACAAAATGTT CCCGCAGGGC TTCAAGCGCA TTGACGCCGC CGCCGGCAGG
CAAAAGGCCG GCATCGGCAC GTGGCTGGGT CCGGTGGGGG GCTACGGAGC CTCCAAGGGC
AAGCGTCTCG CTTACTGGAA CGTGAAGCAT CCGGACAACA AGATCGGTAA TTTCCAGCTC
TCCAACAAGG AATATTTTGA CGCCTTTGTG GGCCGCTGTT CCCAGATGGT GAAGGACTAC
AATATGAAGT ACTTCAAATT CGACGGCATC AGCACTCACT TCCATGCCAA GGGGCCCGGC
AACGAGGAGG ATGCGGAAGG CATCATCCGC GTGCTGAACG CCCTGCGCAA GAAAAAGGGG
GATCTTTACA TCAACTGCAC TGTAGGAACC TGGGCATCCC CCTTCTGGTT CCGTTATGCG
GATTCCGTAT GGAGGCAGGA GAATGACTTC GGCACCATCG GAGCGGGCGA CAACCGCGAC
AAATGGATCA CCTACCGCGA CCGCCTGGTG CATGAAGTTT TTGTGCAGGG TTCCCCGCTG
ATGCCCATCA ATTCCATGAT GACTCACGGC CTGATGGTCA CTAAATTCGG TCCTCCGGCC
TGCATGCCCC GCGATCCGGA AAACGTCAAG AAAGAACTCC GCTGCGCCAC GGCTTGCGGC
ACTTCCCTCC AGGAGCTCTA CGTGGATCGG GACCTGATGA GCGCCAACGG CGGAGTTCTG
TGGGACGAAC TGGCCAAGGG GATCAAGTGG ATACGCCGCA ATGCGGACGT TTTGGACGAT
GTGCACTGGG TGGGCGGCAA TCCGTGGAAC AAGGAAACTA ACGAAGGGGC CGTGTACGGG
TGGGCCGCAT GGAATAAAAA CAAGGCCACC CTGGCTCTCC GCAATTCCTC CGACCAGGAA
AAGAGCCTGA CCGGAACCCT GCGCAGCATT CTGGATATCC CTGCGAACGT CAAGGGCTCC
ATCACCTTCA AGGATTCCTA TGACGACCAG CGGACGCTGG ACGGCTTCTC CGGCAGTTCC
GTAAACATTG ACAAGGAAAT CTCCTTCACG TTGAAGCCCT TTGAGGTGCT GGTGTACGAA
GGGGGAAAGG TCAAATAA
 
Protein sequence
MKFFKTTIAM ATLLGCLPTS PAEVAFPGPA PGTASAEQSA SGYTLSNNIL TAKFILRNGS 
LSFGGMTSKL GPVAKAGDEL FIINLQDGRS IKSSELKAGN VKFVSLQPNP KAFRLADRFP
GKAVSATFQA LNGTLRISWR AVLRDHSHYL RQELRLASMK PVQMKNIVAM QYDLAEGKAG
APSVSGNARG ALIVNDLAFT ALETPMGINT VGGAGNMEGG ETAIWSADKW STASWTGNFN
VPQELKKQYG EQVSSAEGPV SIDGKGACTV TFQYKGGDKG NNKLNLAGVQ LLSSKGAVLD
SDFHNGSTGD SNAGNTYTVQ VPSRGNYILR YWAQTKSEPI ASKGEITFSL PVRTLEEKQE
PQADESRLAQ GLWSRKTTLQ PGEIWDVSSV LGIFAPGQKR RSFLAYMERE RVMPYRPFIH
YNSWYELNIN RNNDSDPAKR MTEEQCLAVL KDWQEQFFQK RGMSIDAFVW DDGWDEFNSL
WDFHKMFPQG FKRIDAAAGR QKAGIGTWLG PVGGYGASKG KRLAYWNVKH PDNKIGNFQL
SNKEYFDAFV GRCSQMVKDY NMKYFKFDGI STHFHAKGPG NEEDAEGIIR VLNALRKKKG
DLYINCTVGT WASPFWFRYA DSVWRQENDF GTIGAGDNRD KWITYRDRLV HEVFVQGSPL
MPINSMMTHG LMVTKFGPPA CMPRDPENVK KELRCATACG TSLQELYVDR DLMSANGGVL
WDELAKGIKW IRRNADVLDD VHWVGGNPWN KETNEGAVYG WAAWNKNKAT LALRNSSDQE
KSLTGTLRSI LDIPANVKGS ITFKDSYDDQ RTLDGFSGSS VNIDKEISFT LKPFEVLVYE
GGKVK