| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0214 |
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| Symbol | |
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| ID | 6275319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 263935 |
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| End bp | 265701 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612259 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_001876838 |
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| Protein GI | 187734726 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGT TGGAGGTTGG CTGGTGTCTA ATCTGCATAC ACAGGGTAGC CGATCAGATT
GTTGAAATTT TGGAGAAGGC GGGAGTTAAG CGGATTTACG GCATTGTGGG GGATAGCCTG
AACCCCGTTA CGGACGCTTT GAGGAGGAGG AAGACCATTG AATGGATTCA TGTGCGGCAT
GAGGAAGTGG CGGCTTTTGC CGCGAGCGCG GAAGCCCAGC TGAGCGGGAA TCTGGCTGTA
TGCTGCGGCA GCAGCGGCCC CGGGAACCTC CATTTGATCA ACGGCCTGTT TGACGCCCAC
CGGAACCATG CCCCGGTGCT GGCCATTGCT TCCCACATCC CGCAGAGCCA GGTAGGCATG
GAATATTTCC AGGCCACGCA TCCGGAACAG CTTTTCAAGG AATGCAGTGC ATATGCGGAA
CTGGTTTCGG AAGCTTCCCA GGCCCCGTCC ATTTTGATGT CCGCCATTCA GCACGCGTGG
GCCAGGCGCG ACGTAGGCGT CGTCGTCTTG CCCGGAGACA TTGCGGACGC CCCTGCGGAG
ATGAAGAATC TGGTGCATCC TCCTTCCTAC ACGCGGGAGA ATGTTGTTCC TGAGCATGAA
TCCGTATCCC TTCTGGCACG GATGCTTGAC GACCACCGCC GCATTACTTT CTTCTGCGGC
GCCGGCTGCG CGGGAGCGGA AGACAAGGTC GTCCGGCTCG CGCACCGCCT GAAAGCTCCG
ATTGCCTACA CATGGAGGGG AAAGGATTAT TTTGAACATG ACAATCCCCT GGGAATCGGC
ATGACGGGGT TGCTTGGATG GGGAGATGCC TACAAGGCCA TGCATGAAAG CGACATGCTC
GTGTTGTGGG GGACGGATTT CCCCTATTTC AATTTCATTC CCACCAAACC TGAAATCGTG
CAGATTGACA GGCGCGGTGA AGTGCTGGGC CGCCGCTGCC GCCTGGACCT GGGTATTTGC
GGGGATGTTT CCGTCACGGC GGAAGCTCTG CTGAACATGG TGCAGGAAAA GACGGATTCC
GGGCATTTGG ACGCCGCCCT GAAACGCCAC GCCAGGGACG TGAAGGAGAT GAACGCCTAT
ATGGAAGGAA ATGACAAGGA GTCTCCCATC CGGCCGGAAC AGCTCACGAC CGCCCTGAAC
AGGCATGCGG CATCCGACGC CGTATTTACG GTAGATACCG GCACCCCCTG TATCTGGAGC
GCCAGGTTCC TGTGCGCCAC GCCGGGAAGG AGGACGCTGG CTTCCTTCAA TCATGGCTCC
ATGGCCAATG CCATGCCGAT GGCTATTGGG GCGCAGATGG AATACCCCGA ACGGCAGGTA
ATTGCCCTGT GCGGAGATGG CGGCCTGTCC ATGCTGCTGG GGGATCTCAT CACGATTGTC
CAGTACAGGC TGCCGGTGAA AATCGTGGTG TATAACAATG ACTGTCTGGA TTTCATCCAA
TTGGAAATGC AGGCGGCCGG GCTGATTCCG TGGCAGATCA ACCTGAACAA CCCCTCTTTT
GCCGCCGTGG CGGATGCCGT CGGCATCAAG GGGTTTTTAT TGGACAAATC CAGCCAGGTG
GACCAGATGG TGGACATGTT CCTGAATTAT CCGGGCGCCG CTCTGCTGGA CGCGCATGTG
GACAGGGACG CCCTTGCCCT GCCTCCCTAC ATCAGTATGG GCCAGGCGGC GGACTTTTCC
CTTGCCATGA TGAAGCAGAC GCTGGCCGGG GAAGTGAAGC AGGTATGGAA CACCCTGGCC
GGAAACAGGA AGCTGTTCAA ACCGTGA
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| Protein sequence | MNPLEVGWCL ICIHRVADQI VEILEKAGVK RIYGIVGDSL NPVTDALRRR KTIEWIHVRH
EEVAAFAASA EAQLSGNLAV CCGSSGPGNL HLINGLFDAH RNHAPVLAIA SHIPQSQVGM
EYFQATHPEQ LFKECSAYAE LVSEASQAPS ILMSAIQHAW ARRDVGVVVL PGDIADAPAE
MKNLVHPPSY TRENVVPEHE SVSLLARMLD DHRRITFFCG AGCAGAEDKV VRLAHRLKAP
IAYTWRGKDY FEHDNPLGIG MTGLLGWGDA YKAMHESDML VLWGTDFPYF NFIPTKPEIV
QIDRRGEVLG RRCRLDLGIC GDVSVTAEAL LNMVQEKTDS GHLDAALKRH ARDVKEMNAY
MEGNDKESPI RPEQLTTALN RHAASDAVFT VDTGTPCIWS ARFLCATPGR RTLASFNHGS
MANAMPMAIG AQMEYPERQV IALCGDGGLS MLLGDLITIV QYRLPVKIVV YNNDCLDFIQ
LEMQAAGLIP WQINLNNPSF AAVADAVGIK GFLLDKSSQV DQMVDMFLNY PGAALLDAHV
DRDALALPPY ISMGQAADFS LAMMKQTLAG EVKQVWNTLA GNRKLFKP
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