Gene Amuc_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0209 
Symbol 
ID6275326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp259057 
End bp260109 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content58% 
IMG OID642612255 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_001876834 
Protein GI187734722 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA TCGTTACGGG CGGCGCCGGA TTCATCGGCT CCAATCTGGT CAGGCTGCTG 
CTGGAGCGCG GCCATGAAGT CTTGAATATT GACGCCCTGA CCTATGCCGG CAACATCCAT
TCACTGGACG GCTCGGCGGA TTCTCCGGCA TACCGCTTTC TGCACGCCGA CGTCCGGGAC
GCTTCCCTGA TGCGGCGCAC TTTGCGGGAG TACGCTCCGG ACTGGGTGAT GCACCTGGCG
GCGGAATCCC ATGTGGACCG TTCCATTGAC GATCCGGGAA ATTTTATGAC CACCAACGTC
ATGGGCACTT TTTCCATGCT TCAGGCCGCC CTGGAATATT ACCGTTCCCT GGAGGGAGAG
AAAAAGGAGC GTTTCCGCTT TCATCACATT TCCACGGATG AAGTGTACGG CTCCCTGGGA
AAGGAAGGCC TGTTCACGGA GTCCACGCCG TATCGCCCCC ATTCCCCGTA TTCCGCCAGC
AAGGCCTCCA GCGACCACCT GGTGCGCGCC TGGCACGATA CGTACGGGCT GCCCGTGCTG
ATCACCAACT GTTCCAACAA TTACGGCCCC TACCAGTTCC CGGAAAAGCT GATACCCGTC
GTTATCCTGA AAGCGCTGGG CGGGGAACCC ATTCCTGTAT ACGGCAAAGG GGAAAACGTG
CGGGACTGGC TGTATGTGGG GGATCACTGC GAGGCGCTGT TGACGGTCGT TTCCTGCGGA
AAACCGGGGG AAACGTACAA CATCGGCGGC AATAACGAGA AAACCAATCT GGAGCTGGTG
GAGCTGCTGT GTTCCCATCT GGATGAACTG CGGCCCCGTC CGGACGGCCG GAGCTACCGG
GAGCAAATCT CCTTTGTGCA GGACAGGCCG GGCCATGACC TGCGCTATGC GATTGACGCT
TCCAAAATAC GGAGGGAATT GGGGTGGACT CCGCGCCAGG ACCATTCTTC CGGATTCAGA
AAGACCATTC AGTGGTATCT GGACCATGAG GAATGGTGGC GGGGCATCCT GTCCGGGGAA
TACCGCCTGG AACGTCTTGG AACCAATGGC TAG
 
Protein sequence
MKVIVTGGAG FIGSNLVRLL LERGHEVLNI DALTYAGNIH SLDGSADSPA YRFLHADVRD 
ASLMRRTLRE YAPDWVMHLA AESHVDRSID DPGNFMTTNV MGTFSMLQAA LEYYRSLEGE
KKERFRFHHI STDEVYGSLG KEGLFTESTP YRPHSPYSAS KASSDHLVRA WHDTYGLPVL
ITNCSNNYGP YQFPEKLIPV VILKALGGEP IPVYGKGENV RDWLYVGDHC EALLTVVSCG
KPGETYNIGG NNEKTNLELV ELLCSHLDEL RPRPDGRSYR EQISFVQDRP GHDLRYAIDA
SKIRRELGWT PRQDHSSGFR KTIQWYLDHE EWWRGILSGE YRLERLGTNG