Gene Amuc_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0203 
Symbol 
ID6275336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp252627 
End bp253028 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content66% 
IMG OID642612249 
Productbiotin/lipoyl attachment domain-containing protein 
Protein accessionYP_001876828 
Protein GI187734716 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0192452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.752214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TTCGCATCAC CGTAGACGGC AAAGTATTTG ACGTATCCGT AGAACTTCTG 
GACCAGGTGT CCTCCACCAC TGCGGCGCCG GCCCCCGCAC CTGTGGCCGC TCCCGCTCCT
GCGGCTTCCG CCCCCGTGGC CGCCCCGGCC CCGGCTCCCG CACCTGCGCC GGCTCCGGCC
GCCGCCGGCG CAGGAGACGT TCCCAGCCCG CTTGCCGGGA AGGTCGTCTC CCTGGACGTG
GCAGCAGGCG CACCCGTGAA GGCCGGTGAC CAGATTCTGA CGCTGGAAGC CATGAAGATG
AACACCATCA TCTACGCTCC CGCCTCCGGC ACGCTCACCG CTTTCTGCGT GAACCCGGGC
GACACGGTTC AGGAAGGACA GGCACTGGCC AAAATTGGTT AA
 
Protein sequence
MKKLRITVDG KVFDVSVELL DQVSSTTAAP APAPVAAPAP AASAPVAAPA PAPAPAPAPA 
AAGAGDVPSP LAGKVVSLDV AAGAPVKAGD QILTLEAMKM NTIIYAPASG TLTAFCVNPG
DTVQEGQALA KIG