| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0190 |
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| Symbol | |
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| ID | 6275353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 240419 |
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| End bp | 241192 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642612236 |
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| Product | peptidase A8 signal peptidase II |
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| Protein accession | YP_001876815 |
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| Protein GI | 187734703 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.459328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.539707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCCCC AGACGGAAAA AGAACCCGCC CCCCATAAAA AGACGCCTCC CGGCTGGCTC
TGGTGGAGCT TGCTGGGCGC AGGGCTGTAT GTGCTGGACC AGGCCAGCAA GCTGTGGATT
ATCCGCCGCT TCCCGCTGAA CTACCTGAAC GAAAAGCACC ATAAGTACGC CTACCTGCCG
GACTTTCCGG GCTTCTCTCA CATCAATGCG GACGGCACGC TGGACTTCGC CACGAACGGG
CGCATGCCGG AAGCGGAACT GGCGAGGCTC CCGGATCTGA ATCCAAACAC GGTGGACGCC
CTGAACAAAC TGAGGGAACT GGAACCCATC TCCTTTCTGG ACGGAACCAT GAACATTACC
CGCGTGCACA ACACGGGCGT TGCCTTCGGG CTGGGGAACG GCACCGTCTG GTCCAGCTAT
CTTTTCCTGG CAGTTCCCGT GCTCGCCATC GTAGTCCTGG TCGTGCTTTA CCGGAAAAAC
CTCTTCCACA CGGCATGGCT CAAGCTGGCC TATGTCCTGC TGCTGGCGGG CGTAGCCGGC
AACCTGACGG ACCGACTGAT TCAGGGGTTC CTGATTCCGT ATGAGCAACA GCACGGTTTC
TTCACCAAGC TGATGAACGG TTACGTGGTG GACTTCATTG ACGTCACCAT CCCCCTCTTC
AACTACCGCT GGCCCGCCTT CAATGTGGCG GACTCCTGCA TCTTCGTAGC GGCAATTATT
TTCTTCGTCG CCAGCATTTT CTCCGCCAAG AATAAAGAAG AAAAAACATC CTGA
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| Protein sequence | MDPQTEKEPA PHKKTPPGWL WWSLLGAGLY VLDQASKLWI IRRFPLNYLN EKHHKYAYLP
DFPGFSHINA DGTLDFATNG RMPEAELARL PDLNPNTVDA LNKLRELEPI SFLDGTMNIT
RVHNTGVAFG LGNGTVWSSY LFLAVPVLAI VVLVVLYRKN LFHTAWLKLA YVLLLAGVAG
NLTDRLIQGF LIPYEQQHGF FTKLMNGYVV DFIDVTIPLF NYRWPAFNVA DSCIFVAAII
FFVASIFSAK NKEEKTS
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