Gene Amuc_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0183 
Symbol 
ID6275365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp230995 
End bp231915 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content56% 
IMG OID642612229 
ProductBeta-lactamase 
Protein accessionYP_001876808 
Protein GI187734696 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.51311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA CCGGTGTTTA TCTATGCGGT TGCATCATGT TCTTTTGCGT TTTTTCTCAG 
GGGGCCACGT CTTCTCCGCC AGCCGTTTCC GCAGCGGATT CCTCCGCCGT ACGCGAACTG
GCCCATTCCC TGAAGGCCCG TGTGGGCATG GCTGCGGAAA TGCTGGATAC GGGGGAAACC
GTCATGGTGG GGGATGAGGC GGCCTATCCC ATGCAGAGCG TCGTCAAATT CGTGCTGGCC
TTGTCCGTCT TGAAGCGGGT GGACCAGGGC GCCATGAATC TGGAACAGAT CATCCGCATA
CGTCCGGAAC AACTGGTGAA AGATACCTGG AGCCCCCTCC GGGAGCGTTT CCCGCAAGGC
GGCGATTTCT CTCTGAAGGA ACTGCTGAGA GTGACTGTCC AGGAAAGCGA CAACAATACC
TGCGACCTCC TGTTTGGCCT TATTGGAGGG CCGCAGGCCG TGCAGAAGGA TTTGAAGGAA
TGGGGAATTG ACGGCATTAA TGTCCGTTTT ACGGAAGAAG AAATACACCG GAATCATGAT
TTGCAATATG TCAACTCAAG CCGTCCGTCG GCCATGAACT CCCTTCTCCG GGCGTTTGAC
GAAGGTAAAA TTTTGAAAAA AGGCACACAG AGTGTTCTTT GGAACATCAT GGCGGGATGT
TCTACAGGTC CTGAACGTCT GAAAGGGCAG CTGCCGCGGG ATTACGTGGT GGCGCATAAG
ACGGGATCCG GATTCACGCT GCCGGGGGGT GGCGTTACCG CCCGCAATGA CGTCGGCATC
ATTGTTCTTC CCAACGGCCG GAAAATGGCG GTTTCCGTGT TCATCAGGGA TTCAAAGGAT
TCTGAATCCG CTTGTGACCG GGTGATCGCC TCCATGGCCC GCTGGCTGTG CCTGGAATGG
CTGGGTGCCG GAGGCAGGTA A
 
Protein sequence
MTSTGVYLCG CIMFFCVFSQ GATSSPPAVS AADSSAVREL AHSLKARVGM AAEMLDTGET 
VMVGDEAAYP MQSVVKFVLA LSVLKRVDQG AMNLEQIIRI RPEQLVKDTW SPLRERFPQG
GDFSLKELLR VTVQESDNNT CDLLFGLIGG PQAVQKDLKE WGIDGINVRF TEEEIHRNHD
LQYVNSSRPS AMNSLLRAFD EGKILKKGTQ SVLWNIMAGC STGPERLKGQ LPRDYVVAHK
TGSGFTLPGG GVTARNDVGI IVLPNGRKMA VSVFIRDSKD SESACDRVIA SMARWLCLEW
LGAGGR