Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0183 |
Symbol | |
ID | 6275365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 230995 |
End bp | 231915 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642612229 |
Product | Beta-lactamase |
Protein accession | YP_001876808 |
Protein GI | 187734696 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.51311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCA CCGGTGTTTA TCTATGCGGT TGCATCATGT TCTTTTGCGT TTTTTCTCAG GGGGCCACGT CTTCTCCGCC AGCCGTTTCC GCAGCGGATT CCTCCGCCGT ACGCGAACTG GCCCATTCCC TGAAGGCCCG TGTGGGCATG GCTGCGGAAA TGCTGGATAC GGGGGAAACC GTCATGGTGG GGGATGAGGC GGCCTATCCC ATGCAGAGCG TCGTCAAATT CGTGCTGGCC TTGTCCGTCT TGAAGCGGGT GGACCAGGGC GCCATGAATC TGGAACAGAT CATCCGCATA CGTCCGGAAC AACTGGTGAA AGATACCTGG AGCCCCCTCC GGGAGCGTTT CCCGCAAGGC GGCGATTTCT CTCTGAAGGA ACTGCTGAGA GTGACTGTCC AGGAAAGCGA CAACAATACC TGCGACCTCC TGTTTGGCCT TATTGGAGGG CCGCAGGCCG TGCAGAAGGA TTTGAAGGAA TGGGGAATTG ACGGCATTAA TGTCCGTTTT ACGGAAGAAG AAATACACCG GAATCATGAT TTGCAATATG TCAACTCAAG CCGTCCGTCG GCCATGAACT CCCTTCTCCG GGCGTTTGAC GAAGGTAAAA TTTTGAAAAA AGGCACACAG AGTGTTCTTT GGAACATCAT GGCGGGATGT TCTACAGGTC CTGAACGTCT GAAAGGGCAG CTGCCGCGGG ATTACGTGGT GGCGCATAAG ACGGGATCCG GATTCACGCT GCCGGGGGGT GGCGTTACCG CCCGCAATGA CGTCGGCATC ATTGTTCTTC CCAACGGCCG GAAAATGGCG GTTTCCGTGT TCATCAGGGA TTCAAAGGAT TCTGAATCCG CTTGTGACCG GGTGATCGCC TCCATGGCCC GCTGGCTGTG CCTGGAATGG CTGGGTGCCG GAGGCAGGTA A
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Protein sequence | MTSTGVYLCG CIMFFCVFSQ GATSSPPAVS AADSSAVREL AHSLKARVGM AAEMLDTGET VMVGDEAAYP MQSVVKFVLA LSVLKRVDQG AMNLEQIIRI RPEQLVKDTW SPLRERFPQG GDFSLKELLR VTVQESDNNT CDLLFGLIGG PQAVQKDLKE WGIDGINVRF TEEEIHRNHD LQYVNSSRPS AMNSLLRAFD EGKILKKGTQ SVLWNIMAGC STGPERLKGQ LPRDYVVAHK TGSGFTLPGG GVTARNDVGI IVLPNGRKMA VSVFIRDSKD SESACDRVIA SMARWLCLEW LGAGGR
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