| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0171 |
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| Symbol | |
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| ID | 6275385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 210072 |
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| End bp | 211634 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612217 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_001876796 |
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| Protein GI | 187734684 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0745729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACGG ACCTTTTCGT CATCGTCATT TACTTTCTTG CTATCTTCTG CATTGGCATT
TATGCGGGAC GAAAGCAAAA CTCCCTGACA GACTATGCCC TGGGCAACCG CTCCCTGCCC
TGGTGGGCTA TTCTGGCCTC TATCCTGGCG GCGGAAATCA GCGCGGCCAC CTTCCTGGGG
GCTCCCGGAG AAGGGTACCA TACCCGCAAC TTCACATACG CCCAGCTCTG CATCGGCACC
ATCCTGGGCC GCATCATCGT CGGCAGGCTC TTTCTCAAGC CCTATTATGA CTACAAGGTT
GTTTCCATCT ATGAATACCT GGAAAAAAGA TTCGGGCTCC TGACGCGGCG GACAGCCTCC
ATGGTCTTCC TGATCAGCCG GGTGCTCGCC AGCGGAACCA GGCTCTATTT CGCGGGCATT
CTGCTGGTCA TTGCCTACCA GTTCCTGACA GGCGTCACGG CAGACGCCGA CCAGATTGTC
CTGCTCTACA TTGCCGCCCT GGTTGCCATC TCCGTCGCCA CGACAATTTA TACCGCGATC
GGAGGATTGA AAGCCGTCGT CTGGACGGAC GTCCTCCAGG CCGTCGTTCT GGGAGTCTCC
ATGCTTTCCG CCCTGTGGGT ACTGTTCTCC CATATCCCCG GAGGGTGGAG CTCCATCTCC
GCCGCCATGA ATGGCGGAGA CGATTGGAAA TTCTTCTCCT GGGGAACCGG AGAAGGCCTG
GACTTCCTCC AACAAGGCGC CCGCGTGCTG GGCCAGGAAT ACACGGTGTG GGCAGCCTTC
CTGGGAGCAA CCTTCATCAC CATGGCTACG CATGGCACGG ACCAGGACAT GGTGCAGCGC
ATGCTGGCGG CAAAAAACAG CAAGGCGGGA ACGCGTGCAG TCATCGTATC CGGCTTGCTG
GACTTCCCCA TCGTCATCAT TTTCCTCTTC ACGGGCATTC TTCTCTATGT CTTCTACCAA
TACAACCCGG CAAACCTCCC TGCAGACACG CCGCAGCTGC ATGTGTTTCC CTACTTCATC
ATCCATGAAC TTCCCAACGG CATCCGCGGG CTGCTGATCG CCGGACTTCT GGCGACGGCC
ATGGGCTCCC TCTCCACGGC TCTAAACTCC CTGGCGACTA CCGCCACCAA GGACTGGTAC
CAGGGGATAT TCAAACCGGA AGCCACGGAA CGGCAGCTGC TCCGGTGCGT GCGCTGGGGA
ACGGCCGTTT TCTCCCTGCT GCTCATCCTC GTGGGTTCCA TCACAGCGTG GTATGTGGTG
CATCACCCGG AAGTCCGCAT CATCCAAATA GCCCTGGGCA TTTTCGGCTA TACCTATGGC
TCCCTGCTTG GCATTTTCCT GTTGGGAATG CTGACCCGCA CCAGAGGCAG CGACTCAGGA
AACATCATTG CCATGGCGGC AGGATTCTTT GTCATCGCTT TACTGACGGA ACTCATCCCT
CTGCCCTCCG GCTGGCAACA ATATGTTCCG GAAATAGCAT TTCCGTGGCG CGTTACCATC
GGAACTCTGG TTACTTTTAC CGTCGGCTTC TGTTTCAGAA AACGCCGCCT TCCCATGCGC
TGA
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| Protein sequence | MLTDLFVIVI YFLAIFCIGI YAGRKQNSLT DYALGNRSLP WWAILASILA AEISAATFLG
APGEGYHTRN FTYAQLCIGT ILGRIIVGRL FLKPYYDYKV VSIYEYLEKR FGLLTRRTAS
MVFLISRVLA SGTRLYFAGI LLVIAYQFLT GVTADADQIV LLYIAALVAI SVATTIYTAI
GGLKAVVWTD VLQAVVLGVS MLSALWVLFS HIPGGWSSIS AAMNGGDDWK FFSWGTGEGL
DFLQQGARVL GQEYTVWAAF LGATFITMAT HGTDQDMVQR MLAAKNSKAG TRAVIVSGLL
DFPIVIIFLF TGILLYVFYQ YNPANLPADT PQLHVFPYFI IHELPNGIRG LLIAGLLATA
MGSLSTALNS LATTATKDWY QGIFKPEATE RQLLRCVRWG TAVFSLLLIL VGSITAWYVV
HHPEVRIIQI ALGIFGYTYG SLLGIFLLGM LTRTRGSDSG NIIAMAAGFF VIALLTELIP
LPSGWQQYVP EIAFPWRVTI GTLVTFTVGF CFRKRRLPMR
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