| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0165 |
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| Symbol | |
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| ID | 6275393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 202275 |
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| End bp | 203357 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612210 |
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| Product | twitching motility protein |
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| Protein accession | YP_001876790 |
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| Protein GI | 187734678 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.753648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.198553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAT ACATTTTGCC CCACGTCGAC GGATATCTCA AACTTGGACA GGATTATGAC
TGTTCCGATA TCCACCTTGC CGTCAACAGC CGTCCCACCT GGCGCCGGTT CGGCCAGCTT
CTCCCCATCT GGGAGGAAGC GCCCAATCTC ACGCCCCAGG ACACGGAAGT GCTGGCGAGG
GGCTTTCTGG AAGACCCGGA ATGGAACCGC CTTCAGCAAC GGGGGGACGT GGACTTCGCC
TACGCCAATG ACTTTGGCCG CTACCGCGCA TCCGTGGTTA AACAGCGCCT GGGTTATGAC
ATCTGCTTCC GCATCATCAA CACGCGGGTG CGCACCATGG AGGAAATAGG CCTGCCGACA
GAATACGTGG TGCCCCTCAC CCGCTACACC AACGGTCTCA TTTTAGTCAC GGGCTCCGTA
GGTTCCGGTA AATCCACCAC GCTGGCCTCT ATCGTGGATT TCATCAACCA GGACCGCCAC
GACCACATCA TCACGCTTGA AGACCCCATC GAATACCTGA TTCCCTCCAA AAACTGCCAC
GTCAACCAGC GTGAAGTGCA TAAACATACG GAATCCTTCG CGCGGGCCCT CCGCGGAGCC
CTCCGTGAAG ACCCAGACGT CATCATGGTG GGCGAAATGC GCGACCTGGA AACCATCTCC
CTGGCGCTCA CGGCGGCAGA AACCGGCCAC CTGGTGCTCG GCACCCTGCA TACGGGTTCC
GCAGCCCGTA CGGTGGACCG CGTGCTGGAC GTCTTCCCGG TGGAACAACG CGACCAGATA
CGCATCATGG TCAGCGAATC CCTGCGCGGC ATCATCTCCC AGCAGCTGGT TCCCAGAGCA
GACGGCAACG GCCGCGCTCT AGCCATTGAA ATGCTGGTTA ATACGCCGGC TATCGCCAAC
TGCATCCGCG AAGGCAAGAC ATTCATGATT CCCGGCTGCA TCCAGACAGG GAAAGCCCAG
GGCATGATCC TGATGGACGA CTCGCTCCGG GCCCTGCACC AGGCGGGCCT CATCACCACG
GAAGACTGCA TCTTCCGCGC GGAAGACAAA ACCATCATGA AATCCTTCCT GGGAATCAAG
TAA
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| Protein sequence | MSEYILPHVD GYLKLGQDYD CSDIHLAVNS RPTWRRFGQL LPIWEEAPNL TPQDTEVLAR
GFLEDPEWNR LQQRGDVDFA YANDFGRYRA SVVKQRLGYD ICFRIINTRV RTMEEIGLPT
EYVVPLTRYT NGLILVTGSV GSGKSTTLAS IVDFINQDRH DHIITLEDPI EYLIPSKNCH
VNQREVHKHT ESFARALRGA LREDPDVIMV GEMRDLETIS LALTAAETGH LVLGTLHTGS
AARTVDRVLD VFPVEQRDQI RIMVSESLRG IISQQLVPRA DGNGRALAIE MLVNTPAIAN
CIREGKTFMI PGCIQTGKAQ GMILMDDSLR ALHQAGLITT EDCIFRAEDK TIMKSFLGIK
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