Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0148 |
Symbol | |
ID | 6275546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 182059 |
End bp | 183288 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642612193 |
Product | Saccharopine dehydrogenase |
Protein accession | YP_001876773 |
Protein GI | 187734661 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGG TTTTAATCAT TGGAGCAGGC GGCGTTGGGC ATGTGGTAGC CAACAAATGC GCCCAGCTGC CGGATATTTT TCAAAACATT CATCTGGCCT CCCGCACGAA GAGCAAATGC GATGCCGTTG CGGAGGACGT ACGCTCCAGA ACGGGCGTCA GCATCACTAC CCATTCCGTA GATGCGGACG ACGTGCCCGC CACCGTAGCC CTCATCCGGG AAATCAAGCC GCAGCTGCTG ATCAACGTAG CCCTGCCCTA CCAGGATCTC ACCCTGATGG AAGCCTGCCT GGAAACCGGA GTCAACTACC TGGATACCGC CAACTATGAA CCCCGTGACG TAGCCAAATT CGAATACTCC TGGCAATGGG CGTACCAGGA GCAATTCCGC AAAGCCGGGC TTTTTGCCCT GCTGGGTTCC GGCTTTGACC CAGGCGTCAC CAATGTATTC ACGGCATGGG CTCTCAAGCA TCACTTTGAC GAAATCCATA CGCTGGACAT CATTGACGTC AATGGCGGCA ATCATGGCAA GGCCTTCGCC ACCAACTTCA ACCCGGAAAT CAACATCCGG GAAGTAACGG CGCCCTGCCG CCACTGGGAA GACGGAGCCT TCCGGGAAAC CGCTCCCATG AGCATGCACC AAAGTTTCAC CTGCCCGCAG GAAGTGGGCA CCTATGAAAT CTACCGCATG TACCATGAAG AAATGGAAAG CCTGGTCAAG CACATCCCCA CCATCCGCCA GGCTCAATTC TGGATGTCCT TCTCACCGAA CTACCTCAAG CACCTGGAAG TGCTTCAGAA CGTGGGTATG ACCCGCATTG ACCCGGTCAT GTACAACGGA GTTGAAATCA TCCCGCTGCA ATTCCTCAAG GCCGTTCTGC CGGACCCCGG GGACCTGGGC AAGACGACCA GGGGAAAAAC CTGCATCGGC AACGTCATCA CCGGAATCAA GGACGGCCAA TTCAAGGCTG TGTACATTTA CAACATTTGC GACCATGAAC AATGCTTTAA AGAAGTAGGT TCCCAGGCCA TTTCCTATAC CACAGGGGTT CCGGCCATGA TCGGCGCGGA AATGATCCTT ACGGGCAAAT GGACTGGCGC AGGAGTCTTC AATATGGAAC AAAATGATCC GGATCCCTTC ATGGACGAGC TCAACAGGCG CGGCCTACCC TGGCACTGCG TGGAACTCAC GGAAGAACAG GCCAAAACCC TGAAGGTCAA CCAGCAATAA
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Protein sequence | MNTVLIIGAG GVGHVVANKC AQLPDIFQNI HLASRTKSKC DAVAEDVRSR TGVSITTHSV DADDVPATVA LIREIKPQLL INVALPYQDL TLMEACLETG VNYLDTANYE PRDVAKFEYS WQWAYQEQFR KAGLFALLGS GFDPGVTNVF TAWALKHHFD EIHTLDIIDV NGGNHGKAFA TNFNPEINIR EVTAPCRHWE DGAFRETAPM SMHQSFTCPQ EVGTYEIYRM YHEEMESLVK HIPTIRQAQF WMSFSPNYLK HLEVLQNVGM TRIDPVMYNG VEIIPLQFLK AVLPDPGDLG KTTRGKTCIG NVITGIKDGQ FKAVYIYNIC DHEQCFKEVG SQAISYTTGV PAMIGAEMIL TGKWTGAGVF NMEQNDPDPF MDELNRRGLP WHCVELTEEQ AKTLKVNQQ
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