Gene Amuc_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0148 
Symbol 
ID6275546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp182059 
End bp183288 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content55% 
IMG OID642612193 
ProductSaccharopine dehydrogenase 
Protein accessionYP_001876773 
Protein GI187734661 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGG TTTTAATCAT TGGAGCAGGC GGCGTTGGGC ATGTGGTAGC CAACAAATGC 
GCCCAGCTGC CGGATATTTT TCAAAACATT CATCTGGCCT CCCGCACGAA GAGCAAATGC
GATGCCGTTG CGGAGGACGT ACGCTCCAGA ACGGGCGTCA GCATCACTAC CCATTCCGTA
GATGCGGACG ACGTGCCCGC CACCGTAGCC CTCATCCGGG AAATCAAGCC GCAGCTGCTG
ATCAACGTAG CCCTGCCCTA CCAGGATCTC ACCCTGATGG AAGCCTGCCT GGAAACCGGA
GTCAACTACC TGGATACCGC CAACTATGAA CCCCGTGACG TAGCCAAATT CGAATACTCC
TGGCAATGGG CGTACCAGGA GCAATTCCGC AAAGCCGGGC TTTTTGCCCT GCTGGGTTCC
GGCTTTGACC CAGGCGTCAC CAATGTATTC ACGGCATGGG CTCTCAAGCA TCACTTTGAC
GAAATCCATA CGCTGGACAT CATTGACGTC AATGGCGGCA ATCATGGCAA GGCCTTCGCC
ACCAACTTCA ACCCGGAAAT CAACATCCGG GAAGTAACGG CGCCCTGCCG CCACTGGGAA
GACGGAGCCT TCCGGGAAAC CGCTCCCATG AGCATGCACC AAAGTTTCAC CTGCCCGCAG
GAAGTGGGCA CCTATGAAAT CTACCGCATG TACCATGAAG AAATGGAAAG CCTGGTCAAG
CACATCCCCA CCATCCGCCA GGCTCAATTC TGGATGTCCT TCTCACCGAA CTACCTCAAG
CACCTGGAAG TGCTTCAGAA CGTGGGTATG ACCCGCATTG ACCCGGTCAT GTACAACGGA
GTTGAAATCA TCCCGCTGCA ATTCCTCAAG GCCGTTCTGC CGGACCCCGG GGACCTGGGC
AAGACGACCA GGGGAAAAAC CTGCATCGGC AACGTCATCA CCGGAATCAA GGACGGCCAA
TTCAAGGCTG TGTACATTTA CAACATTTGC GACCATGAAC AATGCTTTAA AGAAGTAGGT
TCCCAGGCCA TTTCCTATAC CACAGGGGTT CCGGCCATGA TCGGCGCGGA AATGATCCTT
ACGGGCAAAT GGACTGGCGC AGGAGTCTTC AATATGGAAC AAAATGATCC GGATCCCTTC
ATGGACGAGC TCAACAGGCG CGGCCTACCC TGGCACTGCG TGGAACTCAC GGAAGAACAG
GCCAAAACCC TGAAGGTCAA CCAGCAATAA
 
Protein sequence
MNTVLIIGAG GVGHVVANKC AQLPDIFQNI HLASRTKSKC DAVAEDVRSR TGVSITTHSV 
DADDVPATVA LIREIKPQLL INVALPYQDL TLMEACLETG VNYLDTANYE PRDVAKFEYS
WQWAYQEQFR KAGLFALLGS GFDPGVTNVF TAWALKHHFD EIHTLDIIDV NGGNHGKAFA
TNFNPEINIR EVTAPCRHWE DGAFRETAPM SMHQSFTCPQ EVGTYEIYRM YHEEMESLVK
HIPTIRQAQF WMSFSPNYLK HLEVLQNVGM TRIDPVMYNG VEIIPLQFLK AVLPDPGDLG
KTTRGKTCIG NVITGIKDGQ FKAVYIYNIC DHEQCFKEVG SQAISYTTGV PAMIGAEMIL
TGKWTGAGVF NMEQNDPDPF MDELNRRGLP WHCVELTEEQ AKTLKVNQQ