| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0145 |
|---|
| Symbol | |
|---|
| ID | 6275079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 176262 |
|---|
| End bp | 178121 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642612190 |
|---|
| Product | 4-phytase |
|---|
| Protein accession | YP_001876770 |
|---|
| Protein GI | 187734658 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.331033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGT TCATGATGTT CTGTGTGATG CTTTTGCTCG CCGGATGCGA TACGCGCACG
AGCGTGGAAC GGGCGCAGGA GGCAGGGGTG CTCATCGTGG GCAATAATGC GGAGCCCCAG
AGCTTTGACC CCCACATCGC CACTTCCGTT TCCGATTTCA AGATGATCAA TGCCGTCATG
GAGGGGCTGC TGCGCGGGGA TTCCAGGGAT GACGCCGTTT TTCATCCCGC TGTGGCGGAG
TCGTGGACGC ATAGTCCGGA GGCGGACAAG TGGCGTTTTT CCCTCCGGAA GGACGCCGTG
TGGAGCGACG GCGTTCCTGT GACGGCCCAT GATTTCGTGT ATGCCTATCA CCGCCTGCTT
CATCCGGGGT TTGGAGGGAG GTACGCGGAC ATGCTTTATC CGCTGAAGAA TGCGGAAGCC
TATAACCGGA ACAGGCGCAG CCTGCTGCTG TGCGGTCCCG GTTCCCGGCT GGCTGGGGAA
GAGGGGCTGG AAGAGAGGGT TCTGGCCCGG GTGGATTGGG AGAGGCTGGA TGGTATGGGA
GCCGCTGAGC TGGAGGCTCT GCGGGATGAT CCTACCCTGA TGGAGTGGCC GGACGGGATG
CCGGAGGAAG GAGCGCGGAA GATTGCGGCC CGGATGTTGG AGGATGTCCG GGCCGGAAAG
CCGGATTTAT GGGAGGAAGC CCGCGTGGGC GTGCGCGCCG CGGATGATTA TACCCTGGAG
ATGGAGCTGC GTTCTCCGAT GCCCCAGCTT CCCCTGCTGT TGCTTCACTG CACCTGGTTT
CCGGTTCCCC GCCATGCCGT GGAAGCCCAC GGCGGCATGC TGGACAGGAC GGGGAAATGG
ACGCGGCCCG GAGCGGCCGT AGGGAACGGA CCTTTTCTTA TGGCGGAGCA CCGTTTCAAT
GATTATGTGG AGGTGCGCCG CAATCCCCGG TACCGGAACG CTTCCGCCGT CCGGCTGAAT
GGAGTCCGTT TTCTTCCCAC CGTGAACGGC TTTACGGAAA CCCGCATGTT TTTCAACGGC
AAGCTTCATG TCACCAACAA CGTGCCTCCG GAGATGACGG CTTACGCCCG GGAGCGCGGC
GGCGATGATT TTTGCCAGGA TGATTATTAC GTGACTATTT TTTACCGTCT GAATACGTCG
CGTGCGCCGC TGAATGACGC CCGGGTCAGG CGGGCCCTTT CCCTGGCGGT AGACCGGGAG
GCTCTGGTGC GGGACGTGGT GTGCGGCGGC GGCCAGCCGT GCTTCGGCTT TACGCCGGAC
GGCGCCGGAT ACAAGACGCC GCATGGGGTG GAGTTCAATC CGGAGAAAGC GCGTTCCCTG
CTGGCCCAGG CCGGTTTTCC CGGCGGGAAG GGTTTTCCCC GGCTGGAGCT GATGACTACA
TCCCGCGAAG TTCAGAAGAC GATGGCGGAA GCCATCCAGG GCATGTGGAA AAAGCATCTG
GGGATTCATG TGGATATCCG TTCCTGTGAG TGGACGGCCT ACAAGTTCGC GCAGAATTCC
ATGCAGTATG ATTTTAGTTC CTCCTCATGG TCCGGTGATT ATCTGGACCC TTCCAGTTTT
CTGGATTTGT GGGGTTCCGC CTCCGGGAAC AATAATACGG GCTGGTTTCA TCCGGAGTAT
GAACGCCTGC TGGCGGAGAG CCGCGCCACG GGAGACCAGG AGAAGCGCAT GGCCCTGCTG
GCCCGTGCGG AAGCGCTGAT GCTTTCCGAA TCCCCGGTGA TTCCCCTGTA TTGGGCCAAA
CGGTCCTATT TGAAGAGGCC GGAGGTGCGG GGATGGCACC CCCTGCTGCT GGATAACCAT
TTGTTTGAGG ATATCAGCCT GGACGACGCC CGGGAACATG GGAAGGAGGC CGCGCCTTGA
|
|---|
| Protein sequence | MRLFMMFCVM LLLAGCDTRT SVERAQEAGV LIVGNNAEPQ SFDPHIATSV SDFKMINAVM
EGLLRGDSRD DAVFHPAVAE SWTHSPEADK WRFSLRKDAV WSDGVPVTAH DFVYAYHRLL
HPGFGGRYAD MLYPLKNAEA YNRNRRSLLL CGPGSRLAGE EGLEERVLAR VDWERLDGMG
AAELEALRDD PTLMEWPDGM PEEGARKIAA RMLEDVRAGK PDLWEEARVG VRAADDYTLE
MELRSPMPQL PLLLLHCTWF PVPRHAVEAH GGMLDRTGKW TRPGAAVGNG PFLMAEHRFN
DYVEVRRNPR YRNASAVRLN GVRFLPTVNG FTETRMFFNG KLHVTNNVPP EMTAYARERG
GDDFCQDDYY VTIFYRLNTS RAPLNDARVR RALSLAVDRE ALVRDVVCGG GQPCFGFTPD
GAGYKTPHGV EFNPEKARSL LAQAGFPGGK GFPRLELMTT SREVQKTMAE AIQGMWKKHL
GIHVDIRSCE WTAYKFAQNS MQYDFSSSSW SGDYLDPSSF LDLWGSASGN NNTGWFHPEY
ERLLAESRAT GDQEKRMALL ARAEALMLSE SPVIPLYWAK RSYLKRPEVR GWHPLLLDNH
LFEDISLDDA REHGKEAAP
|
|---|
| |