Gene Amuc_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0113 
Symbol 
ID6274930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp141269 
End bp141802 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content60% 
IMG OID642612158 
Productphosphoribosyltransferase 
Protein accessionYP_001876739 
Protein GI187734627 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCTC CTTCACAGGA AATCGTATTG GACGGTCCGG GAATTTCCCG TGCGCTTGAG 
CGCATGGCCC ACGGCATTGT GGCCCGTTTC CCCGGAGAAC CTCTCGCCAT CGTCGGCCTG
CTCAGCCAGG GGGATGTGAT TGCCCGGCGT CTGGTGGACA AGGTAAAGGA GCTGGGAGTG
GAAGCCCAGT ACGGCTCTAT TGATATTTCC CTGTACCGGG ATGACATCTT CAAGCTGGAA
GCCCGGCCTT CCCTCCGTTC CTCCAATTTG CCGTTTTCCA CGGATGACAT GAGGGTCGTG
CTGGTGGACG ACGTCCTTTA TACGGGGCGC ACCATACGTG CAGCCCTGAA CGCCCTTTTC
GACTACGGCC GTCCAGCCCG TATTGAACTG GCGTGCCTGA TTGACCGCGG CGGGCGGGAA
GTTCCCATCC AGCCGGATTA TACGGGGCAC GTGCTGGACC ATGCCGGAGC CAAGGTCATC
GTAAGCATGA AGGAGGCTGA CGGCGAGGAC AGCGTGGTCA TTCCCTCCCA CTGA
 
Protein sequence
MTPPSQEIVL DGPGISRALE RMAHGIVARF PGEPLAIVGL LSQGDVIARR LVDKVKELGV 
EAQYGSIDIS LYRDDIFKLE ARPSLRSSNL PFSTDDMRVV LVDDVLYTGR TIRAALNALF
DYGRPARIEL ACLIDRGGRE VPIQPDYTGH VLDHAGAKVI VSMKEADGED SVVIPSH