Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0113 |
Symbol | |
ID | 6274930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 141269 |
End bp | 141802 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642612158 |
Product | phosphoribosyltransferase |
Protein accession | YP_001876739 |
Protein GI | 187734627 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCTC CTTCACAGGA AATCGTATTG GACGGTCCGG GAATTTCCCG TGCGCTTGAG CGCATGGCCC ACGGCATTGT GGCCCGTTTC CCCGGAGAAC CTCTCGCCAT CGTCGGCCTG CTCAGCCAGG GGGATGTGAT TGCCCGGCGT CTGGTGGACA AGGTAAAGGA GCTGGGAGTG GAAGCCCAGT ACGGCTCTAT TGATATTTCC CTGTACCGGG ATGACATCTT CAAGCTGGAA GCCCGGCCTT CCCTCCGTTC CTCCAATTTG CCGTTTTCCA CGGATGACAT GAGGGTCGTG CTGGTGGACG ACGTCCTTTA TACGGGGCGC ACCATACGTG CAGCCCTGAA CGCCCTTTTC GACTACGGCC GTCCAGCCCG TATTGAACTG GCGTGCCTGA TTGACCGCGG CGGGCGGGAA GTTCCCATCC AGCCGGATTA TACGGGGCAC GTGCTGGACC ATGCCGGAGC CAAGGTCATC GTAAGCATGA AGGAGGCTGA CGGCGAGGAC AGCGTGGTCA TTCCCTCCCA CTGA
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Protein sequence | MTPPSQEIVL DGPGISRALE RMAHGIVARF PGEPLAIVGL LSQGDVIARR LVDKVKELGV EAQYGSIDIS LYRDDIFKLE ARPSLRSSNL PFSTDDMRVV LVDDVLYTGR TIRAALNALF DYGRPARIEL ACLIDRGGRE VPIQPDYTGH VLDHAGAKVI VSMKEADGED SVVIPSH
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