Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0110 |
Symbol | |
ID | 6274939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 138287 |
End bp | 138973 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642612155 |
Product | protein of unknown function UPF0066 |
Protein accession | YP_001876736 |
Protein GI | 187734624 |
COG category | [S] Function unknown |
COG ID | [COG1720] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGCCCG TCGCCCGCGT CAGCACGTGT TATCCGGACA AATTCGGTGC GCCGCGCCAG AGCGGCCTGG TTCCGGATGC GCGGGCGCGG CTGGTATTTG AGCCGCCGTT CCGCCATCCG GATGCCGTTC GTGGTCTGGA AGGGTTTTCC CATCTGTGGC TGGTCTGGGT GTTCAGTGAA AACGTGGATA AGGGGTGGAG CCCTACGGTC CGGCCTCCGC GGCTGGGGGG CAATGTGCGC ATGGGGGTGT TCGCCACGCG TGCGCCGTTC CGTCCCAATC CCATCGGGTT GTCTGCCGTC AGGCTGGAAC GGGTGGAATT GCATCCTCTG GACGGCCCGG TATTGCATCT TTCCGGCGTG GATTTGGTGG ATGGCACCCC CATTCTGGAT ATCAAGCCCT ATGTTCCTCT GGCGGACTGC ATTCCGGAGG CGTCGGAAGG GTTTACGGCT GTCCCCTATG AACGGCTGGA TGTGGAAATT CCCGAATCTT TTGGCGATTC CATGTCTCCG GAAGAGAGGA GTGCACTGGA AGATACGCTG TCCCTGGATC CCCGTCCCCA GTATCAGGAT GATCCGGAAC GGGTTTACGG CCTTTTGTTC TCTGGCTGGG AGGTGAAATT CAAGGTAGAG GGAAAGCGGC TGTGCGTATT GTCCCTGGAA AGGAGGCGAA GCGGTTCCGG CCTTTGA
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Protein sequence | MQPVARVSTC YPDKFGAPRQ SGLVPDARAR LVFEPPFRHP DAVRGLEGFS HLWLVWVFSE NVDKGWSPTV RPPRLGGNVR MGVFATRAPF RPNPIGLSAV RLERVELHPL DGPVLHLSGV DLVDGTPILD IKPYVPLADC IPEASEGFTA VPYERLDVEI PESFGDSMSP EERSALEDTL SLDPRPQYQD DPERVYGLLF SGWEVKFKVE GKRLCVLSLE RRRSGSGL
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