| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0108 |
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| Symbol | |
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| ID | 6274943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 136322 |
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| End bp | 137698 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612153 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001876734 |
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| Protein GI | 187734622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATG CTTCAATAAT ATTGTTAACC AACAACATGA AAGCACACTA TATACTGATA
GCGGCCCTGT GCGGGCTGGC AGGGTGCCGG GAAGACAACG GCGCTGCGGA TGCTGCAAAC
CGGAGGGAAA TGCCTCCGCT CAAGGTTTCC GTGATGAATA TGGAGCAGAG AACGGTGGAG
TTGAAATCTT CCTGGTTCGG CCATTTGCGC GGGGTGGAGC AGGCGGACAT CAGGCCGCAA
GTTTCCGGAA CGCTGATACG CCAGGTTTAC TGGGACGGCT CCATTTGCAA CAAGGGAGAA
CTGCTCTTTG AAATTGACCC GGCTACCTAT CAGGCCGCCG TGGACAGGGA GGCGGCCAAC
CTGGCTACGG CTCGTGCCGT CAAACTTCAG GCGGAAGCTT CTCTGAACAG GGTGCAGAAG
GATTTGGACC GCTATGACAA ACTGATCAGG ACGGGGGCTA TTTCCGTCAA GAACCTGACG
GACGCGCAAC AGAACCTTAA GGAGATGCAG GCTGCTCTGG AAGAGGCGGA AGCGGGCATC
AAGCAGGCGG AAGCCTCCCT GGAAAACGCC CGGATCAATC TGGACCGCAC CAAAGTACGC
GCGCCGTTCC GGGGACTGGC TTCCAAGGCG ACGGCCAGCG TGGGGGAACT GATTTCCGCC
AGCGGCTCGC CGCTCACTAC CATGTCTTCC ATCGACCCCA TCCGGGTGGA TTTTTCCGTG
ACGGGAAAAC AGGTTCTCAG CCGTCTGATG GATGGAACCG TGAATGTGAA AACCGGGCGC
ATGGGAGACA TGCCGGATTT TGAACTGATT CTGGAAGACG GCTCCGTCTT TGAAAAGAAG
GGGAAGGTGG TTTCCGTGGA CAGCGAGGTG AGCCGTTCGA CGGGCACCGT CAATTTCATC
GGCCATATTC CCAATCCGGA TCTGAAACTG CGTTCCGGAA TGGCGGTGCG CGTGCGCGCC
GTGACGGGTA CGGAGAAGGA TGCCTTGCTG GTTCCCGCCC GCGCCCTGCT TTCTTCCATG
AACCACCGCA ACATCATGGT GGTGGCTCCG GACGGGACGC CGCGCCGCAT TGACGTGCAG
CCGGGGGAAA CCGTAGTCCT TGACATGCCT GACGGCAAGG GCGGAACGGC CCCCATGCTG
ATGCAGATAG TGACGGGAAC GGTCAAGCCC ATTCCGGAAT CTCTGAAGGA AATAGGATTC
GGAAAGCCGG CGGATGCTCC CGTCATTGTG GAAGGCGGCA TGATGGCCGC CCAGTATTCC
AAGGCGAACA GCCTGATGCG GGAACATGGT GCCACGGAAG GGTTCGGGAC GGTTGTCCCC
GTTCCCTTCA TCTATACCGC CCCTGTTTCC ACCACTCCTT CCGTAACTGC CAAATAA
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| Protein sequence | MKHASIILLT NNMKAHYILI AALCGLAGCR EDNGAADAAN RREMPPLKVS VMNMEQRTVE
LKSSWFGHLR GVEQADIRPQ VSGTLIRQVY WDGSICNKGE LLFEIDPATY QAAVDREAAN
LATARAVKLQ AEASLNRVQK DLDRYDKLIR TGAISVKNLT DAQQNLKEMQ AALEEAEAGI
KQAEASLENA RINLDRTKVR APFRGLASKA TASVGELISA SGSPLTTMSS IDPIRVDFSV
TGKQVLSRLM DGTVNVKTGR MGDMPDFELI LEDGSVFEKK GKVVSVDSEV SRSTGTVNFI
GHIPNPDLKL RSGMAVRVRA VTGTEKDALL VPARALLSSM NHRNIMVVAP DGTPRRIDVQ
PGETVVLDMP DGKGGTAPML MQIVTGTVKP IPESLKEIGF GKPADAPVIV EGGMMAAQYS
KANSLMREHG ATEGFGTVVP VPFIYTAPVS TTPSVTAK
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