Gene Amuc_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0098 
Symbol 
ID6274972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp124157 
End bp125125 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content62% 
IMG OID642612143 
ProductFmu (Sun) domain protein 
Protein accessionYP_001876724 
Protein GI187734612 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTCCT CCCAAATACT CAAACTCGCC CGCAAACTGG AATTGACGGC GGAACAGGAA 
CGGGATTTCC TGGACGCCAT GCAGGCCGGG AACCGTTCCA GAAGCGCGCT GGTCATCACC
CCGAAGGCAC CGGAAGGCTA CAGGCCGCCC TTGCCGGCAA AGGACACGCC GCAGGAGTGG
GGGCATTCCT CCATCCTGGC GCTCCCGTCC GGAGAGGCGG AAACCAAACC CGGCTCCCTG
CCGGATTACG AATGCGGCTA TTACTATCCC CTGGATCTTT CGTCCGTCTG GGAAACGGCC
CCTCTGGCGC ATCTTCCGTT TCGTCCGGAA CGCTGCCTGG ACATGTGCGC GGCGCCGGGA
GGGAAAAGCA TTCTGGCGCA GACGCGGGTA TCTCCGCAGG AGCATGTTTC CAACGAAGTG
AATCCGAAGC GCCTGGGCAT TCTGCGCCAC AACCTGCTTC GCTGCGGCTT CACCAATCTG
TACACCCAGC GCCTGCGCCC GGACCAGTGG GCGGAACTGG CCCCCGGGTG TTTTGACCTC
ATTCTGGCGG ATGCCCCGTG CAGCGGGCAG TCCCTGCTGG CCAAAGGCAT TCCCAACCCC
GGCTGTTTCA ATTCCTCCGT CACCGGAGGC AACGCCAAGC GGCAGCGGGG CATTTTGCTG
GCCGCCCTCC GGTGTCTGGC TCCCGGCGGC TTCCTGCTGT ACACTACATG CACTTACGCT
CCGGAGGAAA ATGAACGCAA TGTCCTGTAC CTGCTGAAAC GCCATCCGGA CCTGCACACC
ATAACCGTGC CGGAGCTGGA GCATTTCCGT TCCTCCCTGA CGCAGGAAGC CTGCTACCGG
CTCATGCCCT TCCACGGAGC AGGAGCGGGC GGTTTCACCT GCCTGCTGCG CAAGGAGGGA
GGCCATCCGC TCCCGCTTTC CCTGCCGGAT GAATTGAAGG CATGGCCCAT TCATGCCATG
AATTGTTGA
 
Protein sequence
MSSSQILKLA RKLELTAEQE RDFLDAMQAG NRSRSALVIT PKAPEGYRPP LPAKDTPQEW 
GHSSILALPS GEAETKPGSL PDYECGYYYP LDLSSVWETA PLAHLPFRPE RCLDMCAAPG
GKSILAQTRV SPQEHVSNEV NPKRLGILRH NLLRCGFTNL YTQRLRPDQW AELAPGCFDL
ILADAPCSGQ SLLAKGIPNP GCFNSSVTGG NAKRQRGILL AALRCLAPGG FLLYTTCTYA
PEENERNVLY LLKRHPDLHT ITVPELEHFR SSLTQEACYR LMPFHGAGAG GFTCLLRKEG
GHPLPLSLPD ELKAWPIHAM NC