Gene Amuc_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0096 
Symbol 
ID6274977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp122133 
End bp122756 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID642612141 
Producttranscriptional regulator, TraR/DksA family 
Protein accessionYP_001876722 
Protein GI187734610 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA AGCCTGCGCC GAAAACGGCC GGAAAGGCTC CGGTTAAAAA AGCTGCTCCT 
GCTCCCGTTG CCCCGGTTCC CGCTCCCGCG AAAAATGAAT TGACGGATGA ACAGGCGGAA
GCCATTGCCG CCGCCAGGGC GGAACTGGCC GCCAACCCCG AATGGGAGCC TTTTGTGCAG
ATGCAGCGCC AGCATCTGCT GGACTTGCGC GACAGGGCTC TGGACAACAT GAGCGGCGTG
GCTCGCGATA CTCTCCGGAA TCATCCGGAA GGCAGTGAGG CTTCCGGCTC CGGGGAACAC
CAGGCGGATG CCGGCAGTGA CGCCTATGAC CGTGATTTTG CGCTCAGCCT GCTTTCCAAA
GAGCAGGACG GCCTGTATGA AATCGAACAG GCGCTCGCCC GCATTGACAA CGGAACATAT
GGCATCTGCG AAATGTCATA CAAGGTCATT CCCATTCTGC GTCTGGAGGC CATCCCCTTT
GCTCGGCTTA CCGTGGAATG CCAGGCCCAG TGGGAAAAGG AAAAAGGCCA GAATGCCAGG
TTCCGTCCCA GAGTGGCCCT GGGCTTTGCC GGAGGACAAA ATGATGTAGA TTTATCTGTT
TCTCTTGACG ATGACGAAGA ATAG
 
Protein sequence
MEKKPAPKTA GKAPVKKAAP APVAPVPAPA KNELTDEQAE AIAAARAELA ANPEWEPFVQ 
MQRQHLLDLR DRALDNMSGV ARDTLRNHPE GSEASGSGEH QADAGSDAYD RDFALSLLSK
EQDGLYEIEQ ALARIDNGTY GICEMSYKVI PILRLEAIPF ARLTVECQAQ WEKEKGQNAR
FRPRVALGFA GGQNDVDLSV SLDDDEE