Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0092 |
Symbol | |
ID | 6274989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 119968 |
End bp | 120726 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642612137 |
Product | cytochrome c assembly protein |
Protein accession | YP_001876718 |
Protein GI | 187734606 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGATA ACTGGTGGGC CATTGCCTCT CTCATCCTCT CCCTGGCTTT CACAGGGCTG GGATGGCGCC TGCTGGCTTC CGGTCGGCGG TTTTTATATG CCCATCTTTG GATGGCGTGC CTCTTTGTTC TCCAGACAGG GGCGCTATGC GTCAAAGCGT ACCAGACGGG AATGTGTCCC ATCCGCGGCG CTTCAGAGGT GCTCTTCTTC CTCTCCTGGA GCATCAATCT CTTTTATCTG ATGCTGGGAC GTGCTTACCG AATGTCCGTG CTTGGCATCT TTACGGCTCC GGCTATTGCC GTGCTGACGG TTTTTTCCCT GCTGATAGGC CGTTCCGGAG CGGACGTGCA GGGCACGCAT GACTTCTGGG TGACGGCACA TGTGGGCATA GCCATGATGT CCTACGGAGC CGGCGGCCTG GCCGCTGCCG CGGGGGCGGC GTTCTGCATG CAGAATGAAT GTCTTAAAAG ACACCGAATT CCCGGTACCT GCCGTGTGCT TCCTCCCATC CGTACACTGG AAGCCAGCAT GAAGCGCCTG GTTCTTGTGG CATTCCTCCT TCTTCTGCTT GGGGAATGGC TTGGGTGGCG GGGGAATCTC CCCATTAATG CGGCCAAGAC CTCCATTGTC ATTCTTCTCA CGGCAGGCTA CAGCGTCCTG CTGTGGTTCA TCTACCGCCG CGGCATTCCG GGAAGGATGT TGGCCTGCTG CTGCGTGGCC CTCTTTATTG CATCCATGAG CATTTTCCTG GTAAGTTGA
|
Protein sequence | MNDNWWAIAS LILSLAFTGL GWRLLASGRR FLYAHLWMAC LFVLQTGALC VKAYQTGMCP IRGASEVLFF LSWSINLFYL MLGRAYRMSV LGIFTAPAIA VLTVFSLLIG RSGADVQGTH DFWVTAHVGI AMMSYGAGGL AAAAGAAFCM QNECLKRHRI PGTCRVLPPI RTLEASMKRL VLVAFLLLLL GEWLGWRGNL PINAAKTSIV ILLTAGYSVL LWFIYRRGIP GRMLACCCVA LFIASMSIFL VS
|
| |