| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0090 |
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| Symbol | |
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| ID | 6274995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 117979 |
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| End bp | 118956 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642612135 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001876716 |
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| Protein GI | 187734604 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTA AAAATACCCT CATCATCGGC ACCCGCGGGA GCGCCCTGGC CCTGGCCCAG
GCGGATATGG TCCGTGCTGC CCTTTCCCTC CGTTATCCGG AACTGGACGT GCGCTGTGAA
ATCATCCATA CTATTGGGGA CCGCCGCACG GATGTTCCTC TGGCGGATGT GGCCCGCGTT
TCCGGCATGG TGGACAAGGG GATCTTCATT AAGGAACTGG AGACCGCCCT CCGGGATGGC
CGCATTGACG TAGCGGTGCA CAGCCTCAAA GATGTGCCGA GCGAGCTTGC AGCCGGCTTC
ACGCTGGCCG CCGTCTTGCC CCGTGCTGCC GTGGAGGATG TGCTTATCAC GAAAGAACCG
GACTGGAACG GTTCTGGAAC GCTGGCTACC GGAAGCGTGC GCCGACGCCT GATGGCGCGC
ACGTACTGGG GTTCCGGCCT GCGGTTTGAA AACCTGCGGG GGAATGTGCC TACGCGTTTG
GGAAAGCTGG TGGAACATCC CGGCTGGGAT GCCGTGATTC TGGCCAGGGC CGGTTTGGAA
CGCCTGGGGC TGTACGCGCC GGAAACCCTT GTGGAAGGAA GAAAACTTTA CATGCGTCCC
TTGCCGGTGG AAGTTTTTAT TCCTGCTGTG GGGCAGGGCA TCGTTGGAAT GGAATGCCGT
TCCTCGGACA GGGAGACGGC GGAAATGCTG GAAGGCATCA ATGATCCGGA GTCTTTTGCC
TGTGCGCTGG CGGAACGGGC TTTCCTGGTA CGTCTGGGTG CGAACTGTTC CACGCCCGTG
GGTGTTTACG CCCATCCGGA TGGAGAGGAA CTGGTTCTGC GGGCTGCGTA TTACGTTCCG
GGCAGGGAAG AGCCTTTTGC CGTTGTGATT CGCGGAGACC GGAAAGCCCC TGAAGCGCTG
GGCCTTCGGG CTTTTGAAGA ATTGGGCCTG AGTGGATGGC GGAAGACTTC CTCGTGTTCC
GGATGCGGAG AAAAATAA
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| Protein sequence | MTSKNTLIIG TRGSALALAQ ADMVRAALSL RYPELDVRCE IIHTIGDRRT DVPLADVARV
SGMVDKGIFI KELETALRDG RIDVAVHSLK DVPSELAAGF TLAAVLPRAA VEDVLITKEP
DWNGSGTLAT GSVRRRLMAR TYWGSGLRFE NLRGNVPTRL GKLVEHPGWD AVILARAGLE
RLGLYAPETL VEGRKLYMRP LPVEVFIPAV GQGIVGMECR SSDRETAEML EGINDPESFA
CALAERAFLV RLGANCSTPV GVYAHPDGEE LVLRAAYYVP GREEPFAVVI RGDRKAPEAL
GLRAFEELGL SGWRKTSSCS GCGEK
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