Gene Amuc_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0089 
Symbol 
ID6274997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp117286 
End bp117642 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content55% 
IMG OID642612134 
Productprotein of unknown function DUF488 
Protein accessionYP_001876715 
Protein GI187734603 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAA CCATCAAACG AATTTATGAC CCCAAGGAAC CCGGGGACGG ATACCGCGTC 
CTGGTGGACC GGCTCTGGCC CCGCGGCATT TCCAAGGAAA AAGCTTCCTG GGACGAGTGG
CTGAAGAACA TAGCTCCATC CACGGCGCTC CGCCAGTGGT TTGCTCATGA TCCAGTCAGA
TGGGACGCAT TCCGCAAAAA GTACGACGAG GAACTGGATG GAAACGGAGA AGCCGTTTCC
CATCTGCTCC GGCTGGCGCG GAAAGGGAAG GTTACGCTGC TGTACTCCGC CAGAAATACG
GAGCACAACG AAGCTGCGGC TCTGAGGGAT TACCTTTTGC AACGGTTTGC TTCATAA
 
Protein sequence
MNITIKRIYD PKEPGDGYRV LVDRLWPRGI SKEKASWDEW LKNIAPSTAL RQWFAHDPVR 
WDAFRKKYDE ELDGNGEAVS HLLRLARKGK VTLLYSARNT EHNEAAALRD YLLQRFAS