Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0089 |
Symbol | |
ID | 6274997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 117286 |
End bp | 117642 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642612134 |
Product | protein of unknown function DUF488 |
Protein accession | YP_001876715 |
Protein GI | 187734603 |
COG category | [S] Function unknown |
COG ID | [COG3189] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATAA CCATCAAACG AATTTATGAC CCCAAGGAAC CCGGGGACGG ATACCGCGTC CTGGTGGACC GGCTCTGGCC CCGCGGCATT TCCAAGGAAA AAGCTTCCTG GGACGAGTGG CTGAAGAACA TAGCTCCATC CACGGCGCTC CGCCAGTGGT TTGCTCATGA TCCAGTCAGA TGGGACGCAT TCCGCAAAAA GTACGACGAG GAACTGGATG GAAACGGAGA AGCCGTTTCC CATCTGCTCC GGCTGGCGCG GAAAGGGAAG GTTACGCTGC TGTACTCCGC CAGAAATACG GAGCACAACG AAGCTGCGGC TCTGAGGGAT TACCTTTTGC AACGGTTTGC TTCATAA
|
Protein sequence | MNITIKRIYD PKEPGDGYRV LVDRLWPRGI SKEKASWDEW LKNIAPSTAL RQWFAHDPVR WDAFRKKYDE ELDGNGEAVS HLLRLARKGK VTLLYSARNT EHNEAAALRD YLLQRFAS
|
| |