Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0084 |
Symbol | |
ID | 6275024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 110100 |
End bp | 111743 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642612127 |
Product | hypothetical protein |
Protein accession | YP_001876710 |
Protein GI | 187734598 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0897347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATT ATATACCAAT CAACAAGGCA GTTAATCCCG TCTACATCTA TCAAGGGAAT GAGCCTCTTA TCAGCAAGAC GCTCGGAGTT GACGCGATGA CGTTCAACTT TGACGGTTCG GCGTGCGAAC ACGCCACTTG CACCGGAGCG CCGGAAATGT TCATCAAGGT CGAGGAAGAC GGCCTGTACT ATTTCGGCGT GGAAGCCGAC GACACAGGCA GCCTGACGAT TGCCGGTGAG CAAGCTATAA AAAAGGATGG GATACCACCC AACGGCAAAC TGAATATTGA AACCGATTCC AGGTACCTGA AAGCTGGCTA TTACAAGGTG GCCTTGTCTT ACACGAATAA TGCCTACACC CCCGTCAGCA ACAATGCCAT TGCATTCAAC GTCACGATGG ACAGGGAACC CATTCAGGCA GGGAAGTATG AAGGCAACTC AACGATGAAG CGCGAATTCT CGTCGTCCCC CAAAATCAAA TTGTGGACGA TTGAGAAGGA ATCCGCTATC ACCTGTGAGC CATCCAAGGA AGTGGGACTG GAATTTGAGA AACCGGACCC CGTCTATTTG GAAGGGAATG GTGACTGCAA TGTAAGTAGC TTGAGACCTA AGATTTGCGT AACGGTTTGC AAAGATGAAT CGGAAAACGT ATGGAGGTGT CGTGTTGTTT CCGTTTCTGC CGGAGCCAAG CTAACTATGT ATGAAGGCAT TTACGTGAAT CCCTATGTTG ATCCCCCTCT CAATGAAGAA GAAGCCACCG AAGCGGTCAA CGAAATGAAC GGTTATCAAT CTCGTGCAGA AGTTGGAACA TGGCACACGC CGCAGGCTTC CCTCGCCCAC GAAGAACACC ACCGCCGTCA ATGGGAGGAT GCCTACAAGT TCTACTGGAA GGACTCCAAA ATACAGGAAA TGCTTGAAAA TCAGACTATC TCCTGCGACA AAGAACCGAA CATGGATGAA GCCGTGAAGT TCATGCAGGC TCTTGCCAAT GAAATGGCAT TGGACCTTTG GAAAGAAACG TCAGACTATG TACTGGCGTT GCCGGATGAT GCCAATGACA GACCCTATTG CGCGGGACAG GAAGTCCTGA ACGAGGCAAC CGCCTATGTC ATTCGTCTGG CCGACGCGAT GGGGTGGAAC AATGTGCCCA GGTTTATCAC GAAACCTGGA ACGATCGAGC CTCCCTGTTT CATGCCTCCG GTCAGCGAAG GTAAAACCCG CAGCATGGCA ATTGCAGAGG AATCGACACC TCTTCAGATC TCCATTGTGG ACACATCCCA ATTCACGGAG GGCAAAATCA CAGTCCGCTT CTGCAACGAA GGAAACGAGC CTGTCCGCAT TCCCGATGAA ATCAACGACG AAACGTCCGA TTTCTTTTTC GTGACGGTGT TGAGGACGCA ACAGGGGAAA ATGCGCGTTC TGAACAGGGA AATTGGCACC ATGACCTTCC AGCGCCCCTT GAACTACCGG GAGCTTGCAC CCGGTCAGGA ATACAGCGTC ACGATTCCGG CGTGTCTGGA TGAAGTCGAT CTGGAAGGCT GGAAACAATG TTCTTGTGAA CTGGAAACGC GCTACTATAA TCAGCAGGGT AAGGATTGTT TCCTGGGGGT TCTCCGGGCA ACGGCCAGGT TCACGCTGCA ATGA
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Protein sequence | MNNYIPINKA VNPVYIYQGN EPLISKTLGV DAMTFNFDGS ACEHATCTGA PEMFIKVEED GLYYFGVEAD DTGSLTIAGE QAIKKDGIPP NGKLNIETDS RYLKAGYYKV ALSYTNNAYT PVSNNAIAFN VTMDREPIQA GKYEGNSTMK REFSSSPKIK LWTIEKESAI TCEPSKEVGL EFEKPDPVYL EGNGDCNVSS LRPKICVTVC KDESENVWRC RVVSVSAGAK LTMYEGIYVN PYVDPPLNEE EATEAVNEMN GYQSRAEVGT WHTPQASLAH EEHHRRQWED AYKFYWKDSK IQEMLENQTI SCDKEPNMDE AVKFMQALAN EMALDLWKET SDYVLALPDD ANDRPYCAGQ EVLNEATAYV IRLADAMGWN NVPRFITKPG TIEPPCFMPP VSEGKTRSMA IAEESTPLQI SIVDTSQFTE GKITVRFCNE GNEPVRIPDE INDETSDFFF VTVLRTQQGK MRVLNREIGT MTFQRPLNYR ELAPGQEYSV TIPACLDEVD LEGWKQCSCE LETRYYNQQG KDCFLGVLRA TARFTLQ
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