Gene Amuc_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0082 
Symbol 
ID6275032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp108852 
End bp109427 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content48% 
IMG OID642612125 
Producthypothetical protein 
Protein accessionYP_001876708 
Protein GI187734596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.18155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCG AATTCTCGCC TTCTCCCAAA AGCTCGCGCT GCAATGAGAA AATCTTCCAA 
ATTTTAGGGC TTTTGGTCAG CCTGTTCTTC CATGCTCCTG CATGGGGGGA TATGGCCGAT
AACGGGATTG AATGTTCCGT GGTGATGGAA AAGGCTTCGT TCGATCCAAG AGCCGCTTTT
CCGGACTTCA AGCTGGTGTT TGCCAATAAG GGAGAAAAGG CTGTGCGTCT TTTCGACGAC
TTCTATCCTT TCAAGGAACG CGGGCCGAAT ATGATCATCA AGATATGGAG TAAGGGAAAC
GGAAAGAAGG GAAAAAGGCC AACGGCATGG TATCTTCCCT CCTATCAAAT GGAGCGTGTC
GCGAATCTTA TGCACTTTAT TACTCTAAAC CCCGGAGAGA AACATGAAGT GCCCGTCAAG
GATGCGTATT TGCTGCTGAC CTGTTTACAA CCTCTGGCCA GCGGGAAAAT ATATGAATTG
GAAGTACGTT TCCGGGACGA ATATGGAGAT CCGGGTGCCC GGAGGGAGTA TGTGGGGAAA
AAGGATTTTA TCGTCATTGA TCAAACTCCC AGGTGA
 
Protein sequence
MKREFSPSPK SSRCNEKIFQ ILGLLVSLFF HAPAWGDMAD NGIECSVVME KASFDPRAAF 
PDFKLVFANK GEKAVRLFDD FYPFKERGPN MIIKIWSKGN GKKGKRPTAW YLPSYQMERV
ANLMHFITLN PGEKHEVPVK DAYLLLTCLQ PLASGKIYEL EVRFRDEYGD PGARREYVGK
KDFIVIDQTP R