| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0080 |
|---|
| Symbol | |
|---|
| ID | 6275036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 105086 |
|---|
| End bp | 107872 |
|---|
| Gene Length | 2787 bp |
|---|
| Protein Length | 928 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642612123 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_001876706 |
|---|
| Protein GI | 187734594 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCAGC TCCGTTTCAG GAACTTTCCC CTCATGCCAG CAGAAGAAGG CCAGCCAGAC
GACCAGCCCC GGGTGACAGG GCAAGTCCCG CCTCCCGCTC CGACGACAGG CCTGGAACAG
ATTCTGCCCG GACGTCCGCC CCTGCCCCAT GCGGAAGAAA AAGGGGCCTT TTTCGTTTAC
CAGCGGGAGC TGGCTCCCGG CACGCGCCTG GAACAATATG AAATCATCCG CGTCCTGGGC
AGCGGAGGTT TTGGCATCAC ATACCTGGCG AAGGATCTGT TCCTGAACCG CAACGTGGTT
ATCAAGGAAA ACTTCCCTTC AAGATACTCC TACCGGGACC CTCTGACCGG GCATATCCGG
CCCAATAATG AACACGATCT GGAAAATTAC ACCTGGGCTC TGAAAAGTTT TCTGAGCGAG
GCTCAGACGC TGGCGGAGCT CAACAACCCC GGCATCGTCA GAATCCTTTC CGTCTTTGAA
GCCAACGGCA CGGCCTACTT CGCCATGGAG CATATTACCG GCCTTTCCCT GGATTATCTG
GGGGAAAAAC TTCACAGCAC CGGACACCGG TATACGGAAG ACGAACTCAA GGGGCTGCTG
ACGCGTCTGC TCCGGATTCT GGACTATCTC CATTCCCGGC ACATTTACCA CCGGGATATC
AAACCCGGCA ACATCCTGCT GACGGAGGAA GGCACGCCCG TGCTGATCGA CTTCGGAGCG
GCACGGCATG CCCTGAAACT TCATGCCGCC ACCGTCCTGA CCACCCAGGG GTATTCCTCC
CCGGAACAGG CGCTGGGCAA AACGAATATC GGCCCGTGGA GCGATCTCTA TTCCGTAGGG
GCCACTTTTT ACGCCCTGCT TACAGGAAAT CCTCCGGACC GTGCGGAAGC GCGCCTGGCG
GAAGATGAAA TGCAGCCGCT GCACAGCGAC CCCGTGCTCA CCCGCTATTA CTCACGGCAG
TTCCTGCTTT CCCTGGACAA GGCGCTGGCC CCCCAGATCA ATTGCCGCTA CCAGACTGCC
GGCGAATGGA TTCACGACAT TTGCGCCATT TCCGGGGAAG AATCCTCCGC CACTATTCAA
GTCCTCCCGG CAGACCTCCG CCATGCCCAT CCGGAAGGAA TGCCAACTCC CGGCGCCGGG
AAAAACATCG GCAGCAGAAA GGCCGCCACC GGAACGGACG GTCTTCATTC CGCCTCACGC
AGGCAGTCCG CACGCGCTCT TCGCCGCAAC CGCCACATGA TGTCCCTGCT GGTAGGAAGC
GCATGCACCA TCCTGCTGGG AGCGGGAGCA TTTTATCTGC TGGATTACAT GAAAAAAGCC
CCTATGGGCA CTACCATCAA TACCATCAAG GAAGCCATCC AGCAGCCCGC GGCAAGCTCC
AACGTGGGAG AACCGGAACC GCCGCCACGG GATCTGGCAT CCATCCGCAT TCCGGAACTC
AAAATAACGG AAGACGCGGC GCTGGAACCG CGGTCGCTGA CGGAGTTCCG TTTGCGCCTT
GACGACACCA TCCTGACCCG TTCCGGGCTT CCTCCCATCC TGCCGGAAAA ACTGCGCATC
TCCTGCATTT ATCTCCAAAT CATTCCCCCG GCAGCAAACG GGGAAAAACT GTACCTCACC
ATCCGGGACT CCAACGGCGT CCTGGTGGAC CGCTCCATCA ATGCCGTCCC CTCCTTCACG
GTGCCGGGGC AATCCACCTC CACCTTTTTC TTTCCCGCAC TTCCGGAACT GTCCACGGAC
CGCACCTACA CGTACTCCTT TGAAAATGCC GCCCACCAGG CTGTTCCCAT GCAAATGGCA
TGTTTCAAAA ACGAGACGAA ACGCACGGAG GAAGCCTTCC CGAAAATCCG TTTCATCGCT
GCTCCTCCCG TGCCGGAACC AGCCCTGCTC CATGACCCGG CCTACAAAAA TCTTGTGGCG
GCAATCGCCG CGCCCTCCCC GGAGAACAAA AATATTCTCG ACCAGGCAAG TTCCATGCCG
GGCATGCTGC CGGCCCTGGA GCAACTTTCC AAAGCCGGCT ACCCGATAGC CCAGCAGGCA
CTGGGGAAAA CCCTCATGTC TCCGGACTGT CCCGGCGGTT CCAGGCCGGA AGAAGGCGTG
GAATGGCTTT ACCGTTCCGC CACAGGAGGG TGCTATGAAG CCATGAAAGA GCTGGGCATC
CTGCTCATGG ACATCCCCTC CTATTTTCCC CGCCTTCCCC AGCAGCCTCC CCTTGCCTCC
CGGGATTACG CCCAGGCGAC GCGTTTCCTG AGAATGGCGG TCCAATACCG GGACCAGGAG
GCCCTGTACC TGCTTTCCCT CATGTACTCC CAGGGCTGGG GCGTACCCGC CTCCCCGGAA
CTTTCCAGCC TGATGATGGA ACGCCTCAAT GGATCCTCCT ACTCCACGGA CAGCCTGAAT
CCCAACGCGC CTATCGCGGC GTACTGGCTT CCCCTTCCTC TCGCCGGAGA AAAAAACACC
ATTCTGCGCT TCACTATTCC AGGGCCGTTC GCCCCGTCCC AGCTCAAGGG CGTTACTCTG
CACAACACAA GCCTGAAGGA TGCCTTCTCC ATCAGTAAAA TCAATATCCT CCAACATGGG
CGCCTCATTC TGGACATCAT TTCCCCCCAG GAAGTGCTGC CTGGCAAAAG CTCCGCTCCC
ATAGGCATAT CCATCCCGGA AGGGCTGCTG GCGGATACGA CCCTGCCTCT GGAAGTGGAA
ATTTTGCTGA CCCCCGGAAA CAGCTGCGGC GTGGTGGAAA TGCCCCCTCC GGTGGAAAAG
AAAAACTCCG GAATTGAAAT CAATTAA
|
|---|
| Protein sequence | MLQLRFRNFP LMPAEEGQPD DQPRVTGQVP PPAPTTGLEQ ILPGRPPLPH AEEKGAFFVY
QRELAPGTRL EQYEIIRVLG SGGFGITYLA KDLFLNRNVV IKENFPSRYS YRDPLTGHIR
PNNEHDLENY TWALKSFLSE AQTLAELNNP GIVRILSVFE ANGTAYFAME HITGLSLDYL
GEKLHSTGHR YTEDELKGLL TRLLRILDYL HSRHIYHRDI KPGNILLTEE GTPVLIDFGA
ARHALKLHAA TVLTTQGYSS PEQALGKTNI GPWSDLYSVG ATFYALLTGN PPDRAEARLA
EDEMQPLHSD PVLTRYYSRQ FLLSLDKALA PQINCRYQTA GEWIHDICAI SGEESSATIQ
VLPADLRHAH PEGMPTPGAG KNIGSRKAAT GTDGLHSASR RQSARALRRN RHMMSLLVGS
ACTILLGAGA FYLLDYMKKA PMGTTINTIK EAIQQPAASS NVGEPEPPPR DLASIRIPEL
KITEDAALEP RSLTEFRLRL DDTILTRSGL PPILPEKLRI SCIYLQIIPP AANGEKLYLT
IRDSNGVLVD RSINAVPSFT VPGQSTSTFF FPALPELSTD RTYTYSFENA AHQAVPMQMA
CFKNETKRTE EAFPKIRFIA APPVPEPALL HDPAYKNLVA AIAAPSPENK NILDQASSMP
GMLPALEQLS KAGYPIAQQA LGKTLMSPDC PGGSRPEEGV EWLYRSATGG CYEAMKELGI
LLMDIPSYFP RLPQQPPLAS RDYAQATRFL RMAVQYRDQE ALYLLSLMYS QGWGVPASPE
LSSLMMERLN GSSYSTDSLN PNAPIAAYWL PLPLAGEKNT ILRFTIPGPF APSQLKGVTL
HNTSLKDAFS ISKINILQHG RLILDIISPQ EVLPGKSSAP IGISIPEGLL ADTTLPLEVE
ILLTPGNSCG VVEMPPPVEK KNSGIEIN
|
|---|
| |