Gene Amuc_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0076 
Symbol 
ID6275049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp98743 
End bp99246 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content56% 
IMG OID642612119 
ProductNUDIX hydrolase 
Protein accessionYP_001876702 
Protein GI187734590 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000742195 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.603343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAA AAAGCAGCGG CTTTCAATGG CCCGCACAGT GGACCCCCGA TATTCTCGCC 
ACGTTGATGT TCGTGGTGCA GAAAGGAAGG ATTCTCCTGA TACGCAAAAA GAGGGGAATC
GGCGCGGGCA AGGTGAACGG CCCCGGCGGA AAGTTTGAAC CGGGGGAAAC GGCCCTGCAA
TGCGTTTTGC GGGAAGTTCG GGAAGAGCTT CACATTGATA TTGAGGATGC CCGGGAAATG
GGCGTGCTGA ATTTTTCCTT TGCCTGCGGC ACCATTCCGG AAATCCGCTG CCACGTGTTT
ATGGCGACGT CTTTTACAGG CACCCCCACG GAAACCCCCG AGGCGGAGCC CTTCTGGTGT
CCGGTGGACG GGATTCCCTA TGACCTCATG TGGCAGGATG ACCGGTTCTG GCTGCCCGCC
ATGCTGGACG GGAAACGGTT TGAGGCGTTT TTCACGTTTG AGGGGGACCG AATGCTGGAA
TTTTCCCTGA AAGCAGAGGA TTAA
 
Protein sequence
MQEKSSGFQW PAQWTPDILA TLMFVVQKGR ILLIRKKRGI GAGKVNGPGG KFEPGETALQ 
CVLREVREEL HIDIEDAREM GVLNFSFACG TIPEIRCHVF MATSFTGTPT ETPEAEPFWC
PVDGIPYDLM WQDDRFWLPA MLDGKRFEAF FTFEGDRMLE FSLKAED