Gene Amuc_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0073 
Symbol 
ID6275061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp95579 
End bp96373 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content56% 
IMG OID642612115 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001876699 
Protein GI187734587 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000480961 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.411412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATG AAGCCAGATT CGGCGGTATA GGCCGCCTGT ACGGAAACAG CGGACTATCT 
CTTCTCAGAA GCGCCCGCAT AGCCGTCGTC GGCATTGGGG GTGTAGGTTC CTGGGCGGCG
GAAGCCCTGG CTCGGTCAGG CGTAGGCACT ATCATTCTGA TGGATATGGA CGACCTCTGC
ATTACCAACA CCAACCGGCA AATACATGCG TTGGCGTCCA CAATCGGGCA ATCCAAAACG
GAAACCATGG CCACACGCAT CCGGGAAATC AACCCGGAAG CGGAAGTCAT TCCCATCAGC
AATTTCTACA CGGCCTCCAA CGCGGAAAAA CTGCTGTCGG CGGAACCGGA CGTCATCATT
GACGCCATCG ACTCCCTGAT ACCCAAGGCC CACCTCATCG CCTCCTGTTA CCGCGGCAAG
CAACCGCTGG TAACCTGCGG CGGCGCGGGA GGGCGCATCA ATCCCGCCCG GATAGAAATA
GACGACCTCT CCCGCACCAG GGGGGATCCC CTGCTCTCCA GCTTACGCTA CAGGCTGAAA
AAAGATTATG CCCTTCCGCT TGGAGAAAAA GCCCGGAAAC TGAAAATCCC CTGCGTTTTC
TCCCAGGAAA CGCCCGTATA CCCCACCTGC GACGGAAAAA CCTCCTGCAC ACGTGATCCG
GAATTTCAAG GGAAAACGGG TTGTGACGCC GGATTCGGCT CCGTCACCCA TATCACGGGA
ACCTTTGGCT TCTTTGCGGC TTCCGCCGCC ATTCAAATGC TCTTAAATAA GAAAAAAACA
CCATCGTCAT CATGA
 
Protein sequence
MNYEARFGGI GRLYGNSGLS LLRSARIAVV GIGGVGSWAA EALARSGVGT IILMDMDDLC 
ITNTNRQIHA LASTIGQSKT ETMATRIREI NPEAEVIPIS NFYTASNAEK LLSAEPDVII
DAIDSLIPKA HLIASCYRGK QPLVTCGGAG GRINPARIEI DDLSRTRGDP LLSSLRYRLK
KDYALPLGEK ARKLKIPCVF SQETPVYPTC DGKTSCTRDP EFQGKTGCDA GFGSVTHITG
TFGFFAASAA IQMLLNKKKT PSSS