| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0068 |
|---|
| Symbol | |
|---|
| ID | 6275071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 91155 |
|---|
| End bp | 91850 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642612110 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_001876694 |
|---|
| Protein GI | 187734582 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.474681 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGCT GCGCCGCCAT CATCGTTGCG GCCGGGTCCT CCCGGCGTGC CGGATTTGAC
AAGCTGCTGG CCCCCCTGCA CGGCGTCAGG GTGCTGGAAC GCAGCATCCG CGCCTTTGCC
AACTGCCGGG AAATCACGGA AATCGTAGTC GTTTGCCCGG AGGAACGTTT TCATGCCATT
AACGGCGCAA ACCTGGAAAC GGAAATACCC GTTACCCGTG TGGACGGAGG GGCGGAACGG
CATGAATCCG TGCAGAACGG ACTGGCAGCC CTGCTTTATA CCCCGGAATT CGTGGCCGTG
CATGATGGAG CCCGCCCGCT CATTACGGTG GAGCAAATCT CCCGCTGCAT TCAAACCGCC
AGGGAATATG GGGCGTCCGC TTCCGCACAT CCCGTAACGG ACACCCTGAA GCGTGCGGAC
AAAGAACACT TTACGCTTCC GGAACAGGTG GAACGGGACG GGCTGTGGTG CATGGAAACC
CCGCAGGTCT TTCAATATCC TCTTCTCCTG GACGCCTATG TGGAAGTCAC GGAACGGAAT
ATTCAGGTAA CGGATGAAGT AACCGCCCTG CAACTCATCG GCCATCCTAC GCGCCTGGTG
CATAATCATG AGCCCAATCC CAAAATCACA TGGCCGGAAG ATATTTCCCG CGCTGAAATG
CTAATGGAAC TCAAGCACCT CCGCAATGAC TCATGA
|
|---|
| Protein sequence | MKCCAAIIVA AGSSRRAGFD KLLAPLHGVR VLERSIRAFA NCREITEIVV VCPEERFHAI
NGANLETEIP VTRVDGGAER HESVQNGLAA LLYTPEFVAV HDGARPLITV EQISRCIQTA
REYGASASAH PVTDTLKRAD KEHFTLPEQV ERDGLWCMET PQVFQYPLLL DAYVEVTERN
IQVTDEVTAL QLIGHPTRLV HNHEPNPKIT WPEDISRAEM LMELKHLRND S
|
|---|
| |