| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0065 |
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| Symbol | |
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| ID | 6275083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 87991 |
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| End bp | 89547 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612107 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001876691 |
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| Protein GI | 187734579 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.0518457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC AAATCTACTT TTTTGACACT ACCCTGCGCG ATGGAGAACA ATGCCCCGGA
GCATCCATGA ACCTACGCGA AAAGCTGGAA GTGGCGCGTC AAATGGAACG GCTGGGCATG
GACGTGATTG AAGCCGGCTT TCCCTGCATC TCCGACGGCG ACTTTGAAGC CGTGCACACC
ATCGCCCGCG AAATCAAAAA ATGCCGCATC GCTGGTCTGG CCCGCTGCGT AAAGGCGGAC
ATTGAAGCGG CGGCCAAAGC CCTGGAACCC GCCGGGGAAC GTGCCCGCAT CCACATTTTC
CTGGCCACCA GCAAGCTGCA CATGCAGTTC AAACTGAAAA AAGCGGAATC CGAAATCCTG
CGCATGGCCG CGGAAGGCGT ATCCTATGCC AAACAATTTG TCCAGGACGT GGAATTTTCC
CCGGAGGACG CTTCCCGCAC AGACCTGGAC TTCCTGACCA AAGTCGTGGA AACAGTCATC
GACGCCGGCG CCACTACCGT CAACATTCCG GATACCGTGG GCTACACCAC ACCGGACGAG
TTCTACCGCA TCATCCGCCA CCTGAAGGAA AATGTGCCGA ACATCGGCAA AGCCGTCATC
TCCGTGCATT GCCACAATGA CCTTGGCCTG GCCGTAGCAA ACTCCCTGGC AGCCGTCCGC
GCCGGAGCCC GCCAGGTGGA AGGAACCATT AACGGCATCG GCGAACGCGC CGGAAACGTG
GCTCTGGAAG AGGTCATCAT GGCCCTGCGC ACCCGCGCCG GACAATTCGG AGACGTCACG
GACAACATCA ACACGAAGGA AATCGTCCGC ACTTCCCGCA TCGTGGCCCG CATGAGCGGC
ATGCAGGTGC AGCGGTCCAA AGCCATCGTG GGGGAAAACG CTTTCGCCCA CTCTTCAGGC
ATCCACCAGC ACGGCATCCT CAACTGCCGG GAGACCTATG AAGTCATGGA CCCGCAGGCG
GTCGGCTGGG GAGCCACGGA ACTCCCGCTC ACCAAGCATT CCGGACGCGC TGCCGTCAAA
TCCAGGCTGG AACAGCTGGG CCATGTCCTT ACGGAAGAGG AAGTCAACAC CGTCTTTGAA
CGCTTCAAGA AAGTGGGCGA CTCCAAAAAA TTCGTTTATG ATGATGATCT TTCCGCCATT
GTGGACGACT CCCTGCATGC CTCCACCGGT CTATGGGAAC TGGACTTCCT GCAATTCGTG
GCAGGCAGCC ACGCGCGGCC CACGGCTACG GTGGGACTGC TCAAGGAAGG CAAGAAATTT
GAAGACAGCT CCACGGGCAA TGGCGCCGTG GACGCCGTTA TCAAAGCCAT TGAGCGCATC
ACCAGGCGCA AAGGCACGCT GAAAGGCTAC AGCGTCAACG CCGCTTCCGA AGGGAAGGAC
GCTCTGGGAG AAGTAACAGT GCATGTGGAC TTCGGCCAGC CCAAGCCCAT TGTGGGCAAG
GGAGCCTCCA CAGATGTCAT TGAAGCTTCC GCCCGGGCCT ACCTGAACGC GGTCAACCGT
TCTATCCGCA TGGAAAACAT GCCCCAGCCC AATAATCTGG ATGCAGGAAC CATCTAA
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| Protein sequence | MSDQIYFFDT TLRDGEQCPG ASMNLREKLE VARQMERLGM DVIEAGFPCI SDGDFEAVHT
IAREIKKCRI AGLARCVKAD IEAAAKALEP AGERARIHIF LATSKLHMQF KLKKAESEIL
RMAAEGVSYA KQFVQDVEFS PEDASRTDLD FLTKVVETVI DAGATTVNIP DTVGYTTPDE
FYRIIRHLKE NVPNIGKAVI SVHCHNDLGL AVANSLAAVR AGARQVEGTI NGIGERAGNV
ALEEVIMALR TRAGQFGDVT DNINTKEIVR TSRIVARMSG MQVQRSKAIV GENAFAHSSG
IHQHGILNCR ETYEVMDPQA VGWGATELPL TKHSGRAAVK SRLEQLGHVL TEEEVNTVFE
RFKKVGDSKK FVYDDDLSAI VDDSLHASTG LWELDFLQFV AGSHARPTAT VGLLKEGKKF
EDSSTGNGAV DAVIKAIERI TRRKGTLKGY SVNAASEGKD ALGEVTVHVD FGQPKPIVGK
GASTDVIEAS ARAYLNAVNR SIRMENMPQP NNLDAGTI
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