Gene Amuc_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0063 
Symbol 
ID6275087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp86369 
End bp86710 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content58% 
IMG OID642612105 
ProductRhodanese domain protein 
Protein accessionYP_001876689 
Protein GI187734577 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0402698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACCG GGCTGACGGC CCTCTTCGTT TGGCTGAAAG GCAGGAATGC GGAACGTGAC 
CCTGCTTCCT CCGCCATGGT TGTGTCTCCG GAAGGCGCCG CCGCGCGTCC TGTTGTGCTG
GTGGATGTCC GGACTCTGGA TGAGTACCGC ACGGGACATA AGGAGGGCGC CTTGAATATT
CCGGCAGATG AGGTGGAACA ACTGGCCCCC CGGCTTCTTC CCGATAAGAA CGCCGTGATT
ATGCTGTATT GCCGTACGGG AAAGAGAGCG GACAAGGCGC TGGAAGCGCT CAGGAAGATG
GGTTATTCCC ATGTGGAAAA CCTGCACCGG TTCGAAATGT AA
 
Protein sequence
MVTGLTALFV WLKGRNAERD PASSAMVVSP EGAAARPVVL VDVRTLDEYR TGHKEGALNI 
PADEVEQLAP RLLPDKNAVI MLYCRTGKRA DKALEALRKM GYSHVENLHR FEM