Gene Amuc_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0060 
Symbol 
ID6275096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp80688 
End bp83234 
Gene Length2547 bp 
Protein Length848 aa 
Translation table11 
GC content55% 
IMG OID642612103 
ProductAlpha-N-acetylglucosaminidase 
Protein accessionYP_001876687 
Protein GI187734575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.741522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0337012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCAT CCTTTCCCAG AATTCTGATC TTTCTGATGA TGGCAAGCCT GCATGTATTC 
GCGGAAGACA TGCAGAAAAA CAGGGAACGG GAAGCCGCCC GCGCAGTCAT CATGCGGACC
GTGCCGTCTC TGGCCGCCTC CCCGGAAAAA CTGCACCTGG AAACCATTGA AAAAGAAGAC
GGATATGATG TTTTCGAGAC GAAAGCCTCC GGAGGAGTGC TGACGATCCG GGGAAGCAGC
GGCACAGCCC TTTGCCGGGG ATTCTATGAT TTTCTGAAAA CGAACCGTCT GGGAATGGTA
TCCTGGGAAA ACAAAGACAT TCGCTGGCCG GCACAGCTGC CGGACACCGC GCCGCGCCGC
ATCGTTTCTC CTTTCCGCAA CCACTATTAT TTCAATGTGG TCACCTATGG ATACACGATG
CCCTACTGGA CCTGGGAACG CTGGGAAAAG GAAATAGACT GGATGGCTCT GCACGGCATC
AACATGCCCC TGGCTCTGGT TGCCACGGAG GGGATCGCCG TCCGGGTCTG GAAGCAACTG
GGGCTGACGG AAAAAGAAAT AGAAGAATTT TACACGGGGC CGGCCCATCT TCCCTGGCAG
CGGATGGGAA ACATCGTCAA TCATGACGGC CCCCTGCCCG CCAGCTGGCA CAAGGAACAA
ATCGCCCTGC AGCACCGCAT CCTGCACAGG ATGAAATCCT TGGGCATGAC CCCCATTTGT
CCCGCTTTTT CCGGTTTCGT TCCCCGGGGA ATCCTCCGCC TTTATCCGGA AGCGAAGCTT
CACCGGCTGG GGTGGGGAGG CTGGCCTCAA AAAAACCACG CCCATTTTCT TTCTCCGGAA
GAGCCCCTTT TCCTTAAAAT AGGACGCCTG TACATGCAGG AATGGCAGAA GGAATTCGGA
AAAAACACCT ATTTTCTTGC GGACTCCTTC AATGAAATGG AACTTCCCGA AAACAAAGGA
GGCGTCGAAG CCCGCAACAA TATGCTCAGC TCCCTCGGGG AACAAATCTA CCGCTCCATT
TCCTCCACCA ACCCGGATGC GGTATGGGTC ATGCAGGGAT GGATGTTCGG ATACCAGCGC
AATATCTGGA ACGCAGATAC TCTGAAGGCT TTGCTCAGCA AGGTTCCGGA CGATAAGATG
CTCCTTCTGG ACCTGGCGGC GGATTACAAC AAGACTTTCT GGCGCAACGG CATGAACTGG
GACGTCTTCA AGGGTTTTTT CAATAAACCG TGGGTTTACA GCGTGGTTCC CAACATGGGC
GGCAAATGCG CCATGACCGG GGTAATGGAT TTTTACGCCA ACGGCCATCT GGAAGCCTTG
AACTCTTCAT CCAGGGGGCG CCTCTCCGGA ATGGGCATGG CCCCGGAAGG AATAGAAAAT
AACGATGTGA TCTACGAACT GATCACGGAT GCCGCATGGA GGAACCGCCA GGAAAACGTG
GAACAATATC TGGAAAATTA TTGCCGTGCC CGATACGGAA ATTATCCGGA CAGCATGAAG
GAAGCCTGGA ATCTGTTCCG CCGCACAGCC TATTCCAACT TAAAGGACCA TCCCCGTTTC
AACTGGCAAA TGAAACCCGG CACCCGCGGC TGTTCCGTAA ACACAAGCGA AGATTTTCTG
AAAGGCCTCT CCCTGTTCGT CAACACCCGC GGCCTGGAAC AATCCCCCCT GTTCCGCCAG
GATGCCGTTG AGATGGCAGT CCATTATCTT GGCATACGCA TGAATGAAGC CATCCGGGCC
GCCCAGGAAG CTCTGGACGA ACAGGATCAG GAAAACGCGG AAAAATGCAT GGCCTATTTC
CGCAAATACG CCCTTCTGGC AGATTCCCTT CTGGAAGGGC ACCCCACCTG GAGGCTGTCG
CGCTGGATAT CGTTTGCCCG GTCTCACGGA ACTTCTCCTG AGGAAAAAAA CAAGTATGAA
CAAAACGCCA GAAGGCTGGT GACCAGATGG GGGCCTCCCG TAGACGACTA CGCCGCCAAA
ATATGGAGCG GCCTTATCAG GGACTACTAT CTGCCGCGCT GGGAACACTT TATTCAGAGC
CGTCTTTCCG AAAAAAATCC GGATATGGGA GCATGGGAGG AAAAATGGGT CCGTTCCACT
GGCGTAAGCG CTGCGCACGC TCCCGGAGAT CTGGTCAACG CCTGCCGCCA GGCTATCCGG
GAGGCGCCGC CCCTGCCTTC TTCCCTGAAA AGAAAAGCAG CCGGATCAAT TATAGGAAAC
TGGACCTCCG CGACGGTATC CACGGAATGG AGTTATCTGG ACTGGCCCGT TTCTTCCGCT
GATCTTGAAA AACTCCGGGG GGTGCGCTTC GTCTTCACTT CCGGCAGCCA TGCCCTAGAA
ATAGACGGCG TCGAACTCCT GGAAAACGGC AAAGTAATCG CCCACGACCG GCACGCCGGA
TTGGCAGGCA AGCCTTCCCG CGGGAATTTC TACAAACTTT CCCTTCCCAA GGGAATCCAT
GCCAACAACG GATGCTCCCT CAGAGCCAGG GTCCGCTCCG TGGGCGGAAA ATCCTCCAAT
GGGAAACTGG AACTGATTAA AGAATGA
 
Protein sequence
MISSFPRILI FLMMASLHVF AEDMQKNRER EAARAVIMRT VPSLAASPEK LHLETIEKED 
GYDVFETKAS GGVLTIRGSS GTALCRGFYD FLKTNRLGMV SWENKDIRWP AQLPDTAPRR
IVSPFRNHYY FNVVTYGYTM PYWTWERWEK EIDWMALHGI NMPLALVATE GIAVRVWKQL
GLTEKEIEEF YTGPAHLPWQ RMGNIVNHDG PLPASWHKEQ IALQHRILHR MKSLGMTPIC
PAFSGFVPRG ILRLYPEAKL HRLGWGGWPQ KNHAHFLSPE EPLFLKIGRL YMQEWQKEFG
KNTYFLADSF NEMELPENKG GVEARNNMLS SLGEQIYRSI SSTNPDAVWV MQGWMFGYQR
NIWNADTLKA LLSKVPDDKM LLLDLAADYN KTFWRNGMNW DVFKGFFNKP WVYSVVPNMG
GKCAMTGVMD FYANGHLEAL NSSSRGRLSG MGMAPEGIEN NDVIYELITD AAWRNRQENV
EQYLENYCRA RYGNYPDSMK EAWNLFRRTA YSNLKDHPRF NWQMKPGTRG CSVNTSEDFL
KGLSLFVNTR GLEQSPLFRQ DAVEMAVHYL GIRMNEAIRA AQEALDEQDQ ENAEKCMAYF
RKYALLADSL LEGHPTWRLS RWISFARSHG TSPEEKNKYE QNARRLVTRW GPPVDDYAAK
IWSGLIRDYY LPRWEHFIQS RLSEKNPDMG AWEEKWVRST GVSAAHAPGD LVNACRQAIR
EAPPLPSSLK RKAAGSIIGN WTSATVSTEW SYLDWPVSSA DLEKLRGVRF VFTSGSHALE
IDGVELLENG KVIAHDRHAG LAGKPSRGNF YKLSLPKGIH ANNGCSLRAR VRSVGGKSSN
GKLELIKE