Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0054 |
Symbol | |
ID | 6275112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 74190 |
End bp | 74624 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642612097 |
Product | hypothetical protein |
Protein accession | YP_001876681 |
Protein GI | 187734569 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0144492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.105165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGCA CACCCCTGCG GCAGTTTTTT CCCACTCTGG GAGTCGTCAT CCTGCTGGGA TTCTTCCTCT ACAACATGAC GGCACCCACC ACCGGATCAC AGGAAGCGGA GCATTCCGCC CCCACGGCGC AAACCGCGGA TGTTCCCACG GTCATCACGG TCAGATGCGC CCACCGTCCG GAAGCCCTTT CCATCTCCTG CGGCGGCCGT CTTCTCTGGC AGCCCGAAAC GCCCGGGCTG CATGAAGAAA CGGAATGCGG CCTGCCGTTG AAAAACGGTT CCGTAACGCT TACCGTTTCC GCCCGCTGGC CGGAAAACAC GCCGGACACC CCCGTCACGC TGGAACTGGA ACCGGAGGGG AAAACCACCG TCTCCGCCAC CCGCTGGTCC TTCGGCCCCT CCCTGAACGA CAGCTACTCC TTCTCATGGA AATGA
|
Protein sequence | MTSTPLRQFF PTLGVVILLG FFLYNMTAPT TGSQEAEHSA PTAQTADVPT VITVRCAHRP EALSISCGGR LLWQPETPGL HEETECGLPL KNGSVTLTVS ARWPENTPDT PVTLELEPEG KTTVSATRWS FGPSLNDSYS FSWK
|
| |