Gene Amuc_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0054 
Symbol 
ID6275112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp74190 
End bp74624 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content62% 
IMG OID642612097 
Producthypothetical protein 
Protein accessionYP_001876681 
Protein GI187734569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0144492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.105165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA CACCCCTGCG GCAGTTTTTT CCCACTCTGG GAGTCGTCAT CCTGCTGGGA 
TTCTTCCTCT ACAACATGAC GGCACCCACC ACCGGATCAC AGGAAGCGGA GCATTCCGCC
CCCACGGCGC AAACCGCGGA TGTTCCCACG GTCATCACGG TCAGATGCGC CCACCGTCCG
GAAGCCCTTT CCATCTCCTG CGGCGGCCGT CTTCTCTGGC AGCCCGAAAC GCCCGGGCTG
CATGAAGAAA CGGAATGCGG CCTGCCGTTG AAAAACGGTT CCGTAACGCT TACCGTTTCC
GCCCGCTGGC CGGAAAACAC GCCGGACACC CCCGTCACGC TGGAACTGGA ACCGGAGGGG
AAAACCACCG TCTCCGCCAC CCGCTGGTCC TTCGGCCCCT CCCTGAACGA CAGCTACTCC
TTCTCATGGA AATGA
 
Protein sequence
MTSTPLRQFF PTLGVVILLG FFLYNMTAPT TGSQEAEHSA PTAQTADVPT VITVRCAHRP 
EALSISCGGR LLWQPETPGL HEETECGLPL KNGSVTLTVS ARWPENTPDT PVTLELEPEG
KTTVSATRWS FGPSLNDSYS FSWK